RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 RPL26L1Q9UNX3 145 aaKnown RBP13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 LOC285095A0A1B0GVY8 99 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 TTC24A2A3L6 582 aaPredicted RBP13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 ZNF840PA6NDX5 716 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 ENO1P06733 434 aaKnown RBP13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 ALOX15P16050 662 aaPredicted RBP13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 KPNA2P52292 529 aaKnown RBP13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 CDH4P55283 916 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 GNA12Q03113 381 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 TAF12Q16514 161 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 TSNAXIP1Q2TAA8 658 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 SPOUT1Q5T280 376 aaKnown RBP13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 LRRC8EQ6NSJ5 796 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 RFWD3Q6PCD5 774 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 SLC39A5Q6ZMH5 540 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 RINLQ6ZS11 566 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 RNF168Q8IYW5 571 aaPredicted RBP13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 FAM13CQ8NE31 585 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 KCTD4Q8WVF5 259 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 MCUR1Q96AQ8 359 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 PLD4Q96BZ4 506 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 FEM1CQ96JP0 617 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 MIPEPQ99797 713 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 CCDC106Q9BWC9 280 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 VN1R3Q9BXE9 311 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 TAGLN3Q9UI15 199 aa13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 ZFP37Q9Y6Q3 630 aaPredicted RBP13.05□□□□□ -0.32
SPTLC1-201ENST00000262554 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 MROH6A6NGR9 719 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 TK2O00142 265 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 SLC7A4O43246 635 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 COCHO43405 550 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 GJB5O95377 273 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 MYL4P12829 197 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 CCL5P13501 91 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 EZRP15311 586 aaKnown RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 HLA-DPA1P20036 260 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 ARRB2P32121 409 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 ALDH1A3P47895 512 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 GLRBP48167 497 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 ASPHQ12797 758 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 MSLNQ13421 630 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 CFAP157Q5JU67 520 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 LIPMQ5VYY2 423 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 IL31Q6EBC2 164 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 NAPRTQ6XQN6 538 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 DENND1CQ8IV53 801 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 CEP97Q8IW35 865 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 CENPLQ8N0S6 344 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 TEX9Q8N6V9 391 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 ZNF461Q8TAF7 563 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 STYXQ8WUJ0 223 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 CADM1Q9BY67 442 aaKnown RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 PDFQ9HBH1 243 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 TRPM5Q9NZQ8 1165 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 BRCA2P51587 3418 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 GSC2O15499 205 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 KLHL2O95198 593 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 SEC24AO95486 1093 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 EPOP01588 193 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 FGF1P05230 155 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 ATXN1LP0C7T5 689 aaKnown RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 HMGA1P17096 107 aaKnown RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 LEPRP48357 1165 aaKnown RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 IDH3AP50213 366 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 CLCN5P51795 746 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 TAS2R39P59534 338 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 PRAMEP78395 509 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 TLE2Q04725 743 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 TUBB3Q13509 450 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 BTG3Q14201 252 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 RCN2Q14257 317 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 IHHQ14623 411 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 WASHC2DQ5SRD0 308 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 TPGS2Q68CL5 300 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 CNKSR3Q6P9H4 555 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 ATG14Q6ZNE5 492 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 GALNT7Q86SF2 657 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 TREML1Q86YW5 311 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 MFSD6LQ8IWD5 586 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 LMNTD2Q8IXW0 634 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 ARHGAP24Q8N264 748 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 FSTL5Q8N475 847 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 OR13J1Q8NGT2 312 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 TSPAN17Q96FV3 270 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 TOX2Q96NM4 488 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 GATA5Q9BWX5 397 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 ILKAPQ9H0C8 392 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 CDH19Q9H159 772 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 MFSD1Q9H3U5 465 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 TAS2R1Q9NYW7 299 aa13.04□□□□□ -0.32
SPTLC1-201ENST00000262554 A0A0D9SEW6 157 aa13.03□□□□□ -0.32
SPTLC1-201ENST00000262554 B2RBV5 119 aa13.03□□□□□ -0.32
SPTLC1-201ENST00000262554 SPECC1L-ADORA2AF8WAN1 911 aa13.03□□□□□ -0.32
SPTLC1-201ENST00000262554 CLDN11O75508 207 aa13.03□□□□□ -0.32
SPTLC1-201ENST00000262554 ABLIM3O94929 683 aa13.03□□□□□ -0.32
SPTLC1-201ENST00000262554 SOD2P04179 222 aa13.03□□□□□ -0.32
SPTLC1-201ENST00000262554 SERPINF2P08697 491 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms