RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 SSX3Q99909 188 aa10.74□□□□□ -0.69
KPNA3-201ENST00000261667 TUBA1CQ9BQE3 449 aa10.74□□□□□ -0.69
KPNA3-201ENST00000261667 UGT2B28Q9BY64 529 aa10.74□□□□□ -0.69
KPNA3-201ENST00000261667 UCK2Q9BZX2 261 aa10.74□□□□□ -0.69
KPNA3-201ENST00000261667 EFCAB9A8MZ26 197 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 PRSS44E7EML9 344 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 E2F3O00716 465 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 MED7O43513 233 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 GMDSO60547 372 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 COL6A2P12110 1019 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 ZNF3P17036 446 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 TNNI3P19429 210 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 PPIL2Q13356 520 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 PLD1Q13393 1074 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 ORC2Q13416 577 aaPredicted RBP10.73□□□□□ -0.69
KPNA3-201ENST00000261667 PPP1R3AQ16821 1122 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 ATP6AP1LQ52LC2 224 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 SCARA5Q6ZMJ2 495 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 TTC29Q8NA56 475 aaPredicted RBP10.73□□□□□ -0.69
KPNA3-201ENST00000261667 SLC20A1Q8WUM9 679 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 SKA2Q8WVK7 121 aaPredicted RBP10.73□□□□□ -0.69
KPNA3-201ENST00000261667 ALG3Q92685 438 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 UTP4Q969X6 686 aaKnown RBP10.73□□□□□ -0.69
KPNA3-201ENST00000261667 MCEEQ96PE7 176 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 CHCHD6Q9BRQ6 235 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 TBC1D13Q9NVG8 400 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 PCDHA1Q9Y5I3 950 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 ZNF99A8MXY4 864 aaPredicted RBP10.73□□□□□ -0.69
KPNA3-201ENST00000261667 FECHP22830 423 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 CES1P23141 567 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 BTDP43251 543 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 DBPQ10586 325 aaPredicted RBP10.73□□□□□ -0.69
KPNA3-201ENST00000261667 RPA4Q13156 261 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 GRM1Q13255 1194 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 FOXB2Q5VYV0 432 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 ZNF605Q86T29 641 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 TAS2R9Q9NYW1 312 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 CSADQ9Y600 493 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 CPQQ9Y646 472 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 SCN7AQ01118 1682 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 NUDT7P0C024 238 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 NFATC3Q12968 1075 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 ZNF425Q6IV72 752 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 ADGRG6Q86SQ4 1221 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 DTX3Q8N9I9 347 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 EXD1Q8NHP7 514 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 ACTRT2Q8TDY3 377 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 DEDD2Q8WXF8 326 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 DHRS9Q9BPW9 319 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 PPA2Q9H2U2 334 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 LRRC19Q9H756 370 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 SCPEP1Q9HB40 452 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 NKIRAS2Q9NYR9 191 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 NR2E1Q9Y466 385 aa10.73□□□□□ -0.69
KPNA3-201ENST00000261667 MEN1O00255 615 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 BANF1O75531 89 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 ALX3O95076 343 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 TFAP2AP05549 437 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 KELP23276 732 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 IDH2P48735 452 aaKnown RBP10.72□□□□□ -0.69
KPNA3-201ENST00000261667 RPL14P50914 215 aaKnown RBP10.72□□□□□ -0.69
KPNA3-201ENST00000261667 RBBP7Q16576 425 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 HES5Q5TA89 166 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 LCN1P1Q5VSP4 162 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 FAM117BQ6P1L5 589 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 USP17L2Q6R6M4 530 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 STRA8Q7Z7C7 330 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 LEMD2Q8NC56 503 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 C7orf57Q8NEG2 295 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 FBXO30Q8TB52 745 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 PTCD2Q8WV60 388 aaKnown RBP10.72□□□□□ -0.69
KPNA3-201ENST00000261667 RIT1Q92963 219 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 ULK4Q96C45 1275 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 DNPEPQ9ULA0 475 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 UGT2A1Q9Y4X1 527 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 TEX51A0A1B0GUA7 166 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 ATP6AP2A0A1C7CYW4 349 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 MUSKO15146 869 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 NTRK1P04629 796 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 CNPP09543 421 aaKnown RBP10.72□□□□□ -0.69
KPNA3-201ENST00000261667 ERP29P30040 261 aaKnown RBP10.72□□□□□ -0.69
KPNA3-201ENST00000261667 HNF1BP35680 557 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 EMC2Q15006 297 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 MIIPQ5JXC2 388 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 TEKT5Q96M29 485 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 PFDN5Q99471 154 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 KCNS3Q9BQ31 491 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 FEM1AQ9BSK4 669 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 ACSS3Q9H6R3 686 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 IFT22Q9H7X7 185 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 EXD2Q9NVH0 621 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 ZNF451Q9Y4E5 1061 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.72□□□□□ -0.69
KPNA3-201ENST00000261667 ARAP2Q8WZ64 1704 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 DENRO43583 198 aaKnown RBP10.72□□□□□ -0.69
KPNA3-201ENST00000261667 RGS10O43665 173 aa10.72□□□□□ -0.69
KPNA3-201ENST00000261667 CDC40O60508 579 aaKnown RBP eCLIP10.72□□□□□ -0.69
KPNA3-201ENST00000261667 SNRPB2P08579 225 aaKnown RBP10.72□□□□□ -0.69
KPNA3-201ENST00000261667 POLR2CP19387 275 aaPredicted RBP10.72□□□□□ -0.69
KPNA3-201ENST00000261667 S100A2P29034 98 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms