RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ZNF707Q96C28 371 aaPredicted RBP22.58■■□□□ 1.21
SIX3-201ENST00000260653 FAM111AQ96PZ2 611 aa22.58■■□□□ 1.21
SIX3-201ENST00000260653 CCDC195A0A1B0GUA6 201 aa22.58■■□□□ 1.2
SIX3-201ENST00000260653 E2F8A0AVK6 867 aa22.58■■□□□ 1.2
SIX3-201ENST00000260653 TPP1O14773 563 aa22.58■■□□□ 1.2
SIX3-201ENST00000260653 PRKCGP05129 697 aa22.58■■□□□ 1.2
SIX3-201ENST00000260653 SEPT7Q16181 437 aaKnown RBP22.58■■□□□ 1.2
SIX3-201ENST00000260653 SAMD11Q96NU1 681 aa22.58■■□□□ 1.2
SIX3-201ENST00000260653 TDP1Q9NUW8 608 aa22.58■■□□□ 1.2
SIX3-201ENST00000260653 INSIG1O15503 277 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 ZKSCAN8Q15776 578 aaPredicted RBP22.57■■□□□ 1.2
SIX3-201ENST00000260653 MPP7Q5T2T1 576 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 NDUFAF2Q8N183 169 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 DCAF4L2Q8NA75 395 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 ING5Q8WYH8 240 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 ZSWIM3Q96MP5 696 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 PRKD2Q9BZL6 878 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 SCUBE2Q9NQ36 999 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 TOP3BO95985 862 aaKnown RBP22.57■■□□□ 1.2
SIX3-201ENST00000260653 PDE1BQ01064 536 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 PDE12Q6L8Q7 609 aaKnown RBP22.57■■□□□ 1.2
SIX3-201ENST00000260653 SPOCK2Q92563 424 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 TRIB3Q96RU7 358 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 RANBP9Q96S59 729 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 FGFR1OP2Q9NVK5 253 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 ZDHHC7Q9NXF8 308 aa22.57■■□□□ 1.2
SIX3-201ENST00000260653 MT-CO1P00395 513 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 HLA-DPA1P20036 260 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 TAC1P20366 129 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 ETV4P43268 484 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 LIMK2P53671 638 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 LEMD2Q8NC56 503 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 IQCGQ9H095 443 aaKnown RBP22.56■■□□□ 1.2
SIX3-201ENST00000260653 CHKBQ9Y259 395 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 FCF1Q9Y324 198 aaKnown RBP22.56■■□□□ 1.2
SIX3-201ENST00000260653 MYO9BQ13459 2157 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 ANKRD36A6QL64 1941 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 EPOP01588 193 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 FGF1P05230 155 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 SPRP35270 261 aaPredicted RBP22.56■■□□□ 1.2
SIX3-201ENST00000260653 LMAN2Q12907 356 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 DNAJC3Q13217 504 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 TSTD2Q5T7W7 516 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 FYB2Q5VWT5 728 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 KIAA0930Q6ICG6 404 aaPredicted RBP22.56■■□□□ 1.2
SIX3-201ENST00000260653 MCMBPQ9BTE3 642 aa22.56■■□□□ 1.2
SIX3-201ENST00000260653 WDR91A4D1P6 747 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 PIRTP0C851 137 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 CEBPBP17676 345 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 SF3A3Q12874 501 aaKnown RBP eCLIP22.55■■□□□ 1.2
SIX3-201ENST00000260653 CBX2Q14781 532 aaPredicted RBP22.55■■□□□ 1.2
SIX3-201ENST00000260653 PDK4Q16654 411 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 FSTL4Q6MZW2 842 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 DENND6AQ8IWF6 608 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 DCLK2Q8N568 766 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 NUDCD1Q96RS6 583 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 MKS1Q9NXB0 559 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 LHX3Q9UBR4 397 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 GGT7Q9UJ14 662 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 K7ERQ8 282 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 PAMP19021 973 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 CD70P32970 193 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 INO80DQ53TQ3 878 aaPredicted RBP22.55■■□□□ 1.2
SIX3-201ENST00000260653 RNF43Q68DV7 783 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 CNTN4Q8IWV2 1026 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 C12orf76Q8N812 135 aaPredicted RBP22.55■■□□□ 1.2
SIX3-201ENST00000260653 OR13J1Q8NGT2 312 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 BLOC1S5Q8TDH9 187 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 C2orf49Q9BVC5 232 aaPredicted RBP22.55■■□□□ 1.2
SIX3-201ENST00000260653 MTO1Q9Y2Z2 717 aaKnown RBP22.55■■□□□ 1.2
SIX3-201ENST00000260653 KCTD3Q9Y597 815 aa22.55■■□□□ 1.2
SIX3-201ENST00000260653 MROH6A6NGR9 719 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 NDST3O95803 873 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 CTBP1Q13363 440 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 SLC14A2Q15849 920 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 CMC1Q7Z7K0 106 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 TMEM25Q86YD3 366 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 FIBINQ8TAL6 211 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 TDRD1Q9BXT4 1180 aaKnown RBP22.54■■□□□ 1.2
SIX3-201ENST00000260653 PBX4Q9BYU1 374 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 PLLPQ9Y342 182 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 PCDHGC4Q9Y5F7 938 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 C5orf42Q9H799 3197 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 LDB2O43679 373 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 CYBBP04839 570 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 DHRS4L1P0CG22 281 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 CSE1LP55060 971 aaKnown RBP22.54■■□□□ 1.2
SIX3-201ENST00000260653 HNRNPH2P55795 449 aaKnown RBP22.54■■□□□ 1.2
SIX3-201ENST00000260653 PDE1CQ14123 709 aaPredicted RBP22.54■■□□□ 1.2
SIX3-201ENST00000260653 VPS39Q96JC1 886 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 DPP7Q9UHL4 492 aa22.54■■□□□ 1.2
SIX3-201ENST00000260653 CCL22O00626 93 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 GABRB3P28472 473 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 RHOAP61586 193 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 ZNF77Q15935 545 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 ATXN7L2Q5T6C5 722 aaPredicted RBP22.53■■□□□ 1.2
SIX3-201ENST00000260653 ARMC3Q5W041 872 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 ACVR1CQ8NER5 493 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 GDPD5Q8WTR4 605 aa22.53■■□□□ 1.2
SIX3-201ENST00000260653 PTPRN2Q92932 1015 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms