RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 SHDQ96IW2 340 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 AARSD1Q9BTE6 412 aaKnown RBP17.03■□□□□ 0.32
SORT1-201ENST00000256637 ADGRB2O60241 1585 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 OR6C75A6NL08 312 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 FAM25AB3EWG3 89 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 FAM25CB3EWG5 89 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 FAM25GB3EWG6 89 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 CATP04040 527 aaKnown RBP17.03■□□□□ 0.32
SORT1-201ENST00000256637 PAEPP09466 180 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 FGFR3P22607 806 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 S100A5P33763 92 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 NR2C2P49116 596 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 CTBP1Q13363 440 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 FAM182AQ5T1J6 154 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 PNPT1Q8TCS8 783 aaKnown RBP17.03■□□□□ 0.32
SORT1-201ENST00000256637 SLC20A2Q08357 652 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 C1orf186Q6ZWK4 172 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 CAPN6Q9Y6Q1 641 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 CD3EAPO15446 510 aaKnown RBP17.03■□□□□ 0.32
SORT1-201ENST00000256637 B4GALT4O60513 344 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 MT-CYBP00156 380 aaPredicted RBP17.03■□□□□ 0.32
SORT1-201ENST00000256637 C1QBPQ07021 282 aaKnown RBP17.03■□□□□ 0.32
SORT1-201ENST00000256637 CEP78Q5JTW2 689 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 CNKSR3Q6P9H4 555 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 UBE2R2Q712K3 238 aaPredicted RBP17.03■□□□□ 0.32
SORT1-201ENST00000256637 NMRAL1Q9HBL8 299 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 ETNK2Q9NVF9 386 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 GTF2IRD1Q9UHL9 959 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 PHTF1Q9UMS5 762 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 ITGB5P18084 799 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 MRPS5P82675 430 aaKnown RBP17.03■□□□□ 0.32
SORT1-201ENST00000256637 TTI2Q6NXR4 508 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 NCKIPSDQ9NZQ3 722 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 DUSP12Q9UNI6 340 aa17.03■□□□□ 0.32
SORT1-201ENST00000256637 PEX1O43933 1283 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 PSEN1P49768 467 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 STXBP5Q5T5C0 1151 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 PROX1Q92786 737 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 TBC1D14Q9P2M4 693 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 COLEC10Q9Y6Z7 277 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 SPATA31D1Q6ZQQ2 1576 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 A0A096LPK6 155 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 UQCRBP14927 111 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 CASP7P55210 303 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 CLHC1Q8NHS4 586 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 MGAT5Q09328 741 aa17.02■□□□□ 0.32
SORT1-201ENST00000256637 CSTF3Q12996 717 aaKnown RBP17.02■□□□□ 0.32
SORT1-201ENST00000256637 OTUD3Q5T2D3 398 aaPredicted RBP17.02■□□□□ 0.32
SORT1-201ENST00000256637 CSF2RAP15509 400 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 HSD17B3P37058 310 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 ZNF155Q12901 538 aaPredicted RBP17.02■□□□□ 0.31
SORT1-201ENST00000256637 ANKRD52Q8NB46 1076 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 WDR36Q8NI36 951 aaKnown RBP17.02■□□□□ 0.31
SORT1-201ENST00000256637 KIF2CQ99661 725 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 SGK2Q9HBY8 427 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 RBM7Q9Y580 266 aaKnown RBP17.02■□□□□ 0.31
SORT1-201ENST00000256637 TCRBV21S2A2A0A5A6 115 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 E9PAM4 449 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 FPGTO14772 594 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 TRAPPC6AO75865 159 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 NR2F1P10589 423 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 KDELR1P24390 212 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 LMO2P25791 158 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 GRM5P41594 1212 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 SULT2A1Q06520 285 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 CYP4Z2PQ8N1L4 340 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 TMEM132CQ8N3T6 1108 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 OR7D4Q8NG98 312 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 DCBLD2Q96PD2 775 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 GRIP2Q9C0E4 1043 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 INTS7Q9NVH2 962 aaKnown RBP17.02■□□□□ 0.31
SORT1-201ENST00000256637 ARL2BPQ9Y2Y0 163 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 RAD54BQ9Y620 910 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 WNT6Q9Y6F9 365 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 A8MUI8 341 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 SAP18O00422 153 aaKnown RBP17.02■□□□□ 0.31
SORT1-201ENST00000256637 MAN1A2O60476 641 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 LINC00032P0C843 101 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 PABPC1P11940 636 aaKnown RBP17.02■□□□□ 0.31
SORT1-201ENST00000256637 COPAP53621 1224 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 CHRNB3Q05901 458 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 CYP4F3Q08477 520 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 CHRDL2Q6WN34 429 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 ASZ1Q8WWH4 475 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 GRAMD1AQ96CP6 724 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 YIPF3Q9GZM5 350 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 ATG10Q9H0Y0 220 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 KBTBD4Q9NVX7 518 aa17.02■□□□□ 0.31
SORT1-201ENST00000256637 KCPQ6ZWJ8 1503 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 PSMD9O00233 223 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 FGF18O76093 207 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 TBX18O95935 607 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 PLGP00747 810 aaPredicted RBP17.01■□□□□ 0.31
SORT1-201ENST00000256637 IL5RAQ01344 420 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 MTA1Q13330 715 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 TRIP10Q15642 601 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 PTPRNQ16849 979 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 PSTKQ8IV42 348 aaKnown RBP17.01■□□□□ 0.31
SORT1-201ENST00000256637 ZNF557Q8N988 423 aaPredicted RBP17.01■□□□□ 0.31
SORT1-201ENST00000256637 TMEM161BQ8NDZ6 487 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms