RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
VHL-201ENST00000256474 CYP2S1Q96SQ9 504 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 DCUN1D5Q9BTE7 237 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 AP5M1Q9H0R1 490 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 COQ10BQ9H8M1 238 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 SARS2Q9NP81 518 aaKnown RBP13.63□□□□□ -0.23
VHL-201ENST00000256474 ETAA1Q9NY74 926 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 PTPRFP10586 1907 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 ERI2A8K979 691 aaKnown RBP13.63□□□□□ -0.23
VHL-201ENST00000256474 PSMD12O00232 456 aaPredicted RBP13.63□□□□□ -0.23
VHL-201ENST00000256474 STAU1O95793 577 aaKnown RBP13.63□□□□□ -0.23
VHL-201ENST00000256474 CLIC3O95833 236 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 HLA-DQB2P05538 268 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 GLDCP23378 1020 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 SLC7A2P52569 658 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 TIGD5Q53EQ6 642 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 PCID2Q5JVF3 399 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 ARHGAP18Q8N392 663 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 RNF103-CHMP3A0A140T963 221 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 ARHGEF37A1IGU5 675 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 TMEM114B3SHH9 223 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 PDLIM1O00151 329 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 MRASO14807 208 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 SBK3P0C264 359 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 CHRM3P20309 590 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 CXCL17Q6UXB2 119 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 LSMEM2Q8N112 164 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 HBEGFQ99075 208 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 GPR22Q99680 433 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 RCOR3Q9P2K3 495 aaPredicted RBP13.62□□□□□ -0.23
VHL-201ENST00000256474 TRHDEQ9UKU6 1024 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 H3BSA7 217 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 PFDN1O60925 122 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 TOMM70O94826 608 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 FAM58BPP0C7Q3 252 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 PSMC3P17980 439 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 PSEN2P49810 448 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 WNT3AP56704 352 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 C1QTNF8P60827 252 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 STX1BP61266 288 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 NAB1Q13506 487 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 ADGRE1Q14246 886 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 HDAC10Q969S8 669 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 GLOD4Q9HC38 313 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 DMAP1Q9NPF5 467 aaPredicted RBP13.62□□□□□ -0.23
VHL-201ENST00000256474 UTP6Q9NYH9 597 aaKnown RBP13.62□□□□□ -0.23
VHL-201ENST00000256474 ST3GAL5Q9UNP4 418 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 PRG3Q9Y2Y8 225 aaPredicted RBP13.62□□□□□ -0.23
VHL-201ENST00000256474 AP4S1Q9Y587 144 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 TADA2AO75478 443 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 FBXO21O94952 628 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 GFAPP14136 432 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 CSE1LP55060 971 aaKnown RBP13.62□□□□□ -0.23
VHL-201ENST00000256474 UGP2Q16851 508 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 ZNF423Q2M1K9 1284 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 UBXN11Q5T124 520 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 KLC3Q6P597 504 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 OLFM1Q99784 485 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 TMLHEQ9NVH6 421 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 IPO11Q9UI26 975 aaKnown RBP13.62□□□□□ -0.23
VHL-201ENST00000256474 FAM50BQ9Y247 325 aa13.62□□□□□ -0.23
VHL-201ENST00000256474 FOXD2O60548 495 aaPredicted RBP13.61□□□□□ -0.23
VHL-201ENST00000256474 SOAT2O75908 522 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 TBX18O95935 607 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 PAMP19021 973 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 LRPAP1P30533 357 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 ECT2LQ008S8 904 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 DSC2Q02487 901 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 GNASQ5JWF2 1037 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 C14orf80Q86SX3 495 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 CUZD1Q86UP6 607 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 ZNF419Q96HQ0 510 aaPredicted RBP13.61□□□□□ -0.23
VHL-201ENST00000256474 EXOC2Q96KP1 924 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 ZNF512Q96ME7 567 aaPredicted RBP13.61□□□□□ -0.23
VHL-201ENST00000256474 GDAP2Q9NXN4 497 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 BCAP29Q9UHQ4 241 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 AAR2Q9Y312 384 aaKnown RBP13.61□□□□□ -0.23
VHL-201ENST00000256474 DERAQ9Y315 318 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 C17orf102A2RUQ5 167 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 STXBP5Q5T5C0 1151 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 UGT2A3Q6UWM9 527 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 LINC00523Q86TU6 105 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 ZNF786Q8N393 782 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 TMIGD2Q96BF3 282 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 SMARCD1Q96GM5 515 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 LRCH3Q96II8 777 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 KCNA7Q96RP8 456 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 SP110Q9HB58 689 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 ZBTB26Q9HCK0 441 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 LCTP09848 1927 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 MAGEB16A2A368 324 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 J3KR12 359 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 SDHDO14521 159 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 RTN3O95197 1032 aaPredicted RBP13.61□□□□□ -0.23
VHL-201ENST00000256474 PRSS56P0CW18 603 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 DYNC1I2Q13409 638 aaKnown RBP13.61□□□□□ -0.23
VHL-201ENST00000256474 DDR2Q16832 855 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 PFKFB4Q16877 469 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 VPS26BQ4G0F5 336 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 ZBTB49Q6ZSB9 765 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms