RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 LRRN4Q8WUT4 740 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 SEMA3CQ99985 751 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 RSPH9Q9H1X1 276 aaPredicted RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 PCYOX1Q9UHG3 505 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 PDE5AO76074 875 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 PCCBP05166 539 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 ANXA6P08133 673 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 ZNF24P17028 368 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 HTR1BP28222 390 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 GABRR2P28476 465 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 GRIA4P48058 902 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 HSPA14Q0VDF9 509 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 OTUD3Q5T2D3 398 aaPredicted RBP8.78□□□□□ -1
PTCD3-201ENST00000254630 ZDHHC20Q5W0Z9 365 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 FAM151BQ6UXP7 276 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 CYP2R1Q6VVX0 501 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 COL26A1Q96A83 441 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 SLC4A9Q96Q91 983 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 VAV3Q9UKW4 847 aa8.78□□□□□ -1
PTCD3-201ENST00000254630 SMIM31A0A1B0GVY4 71 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 KLRC4O43908 158 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 C4BPBP20851 252 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 FGFR3P22607 806 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 MATKP42679 507 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 PSMD8P48556 350 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 STX4Q12846 297 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 BRMS1LQ5PSV4 323 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 CEP68Q76N32 757 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 FAM220AQ7Z4H9 259 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 SLC9A9Q8IVB4 645 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 LRRC52Q8N7C0 313 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 OR10G6Q8NH81 332 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 CD99L2Q8TCZ2 262 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 ART4Q93070 314 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 DNAJC19Q96DA6 116 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 KLRG1Q96E93 195 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 TPRKBQ9Y3C4 175 aa8.77□□□□□ -1
PTCD3-201ENST00000254630 PAGE1O75459 146 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 ELNP15502 786 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 RTP1P59025 263 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 COPZ1P61923 177 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 TRIQKQ629K1 86 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 POU5F2Q8N7G0 328 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 OR5B17Q8NGF7 314 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 OR52L1Q8NGH7 329 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 OR4L1Q8NH43 312 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 RNFT2Q96EX2 444 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 REEP1Q9H902 201 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 ARMCX1Q9P291 453 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 BTRCQ9Y297 605 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 MTF2Q9Y483 593 aaPredicted RBP8.77□□□□□ -1.01
PTCD3-201ENST00000254630 CAMTA1Q9Y6Y1 1673 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 KDM4FA0A1W2PPD8 638 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 KRT75O95678 551 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 SHBGP04278 402 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 ELFN1P0C7U0 828 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 SPATA31C1P0DKV0 1188 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 RPL3P39023 403 aaKnown RBP8.77□□□□□ -1.01
PTCD3-201ENST00000254630 BRCC3P46736 316 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 POLD2P49005 469 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 MAXP61244 160 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 NOMO3P69849 1222 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 IRF8Q02556 426 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 SLC34A1Q06495 639 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 SMARCB1Q12824 385 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 CNSTQ6PJW8 725 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 TSHZ1Q6ZSZ6 1077 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 RASAL3Q86YV0 1011 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 CREG2Q8IUH2 290 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 LINGO1Q96FE5 620 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 KCTD15Q96SI1 283 aaPredicted RBP8.77□□□□□ -1.01
PTCD3-201ENST00000254630 MRPL57Q9BQC6 102 aaKnown RBP8.77□□□□□ -1.01
PTCD3-201ENST00000254630 ANAPC2Q9UJX6 822 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 L1RE1Q9UN81 338 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 TRIM43BA6NCK2 446 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 NT5C1B-RDH14C9J2C7 533 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 E7ENQ6 273 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 CLPTM1O96005 669 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 ME2P23368 584 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 RPL22P35268 128 aaKnown RBP8.77□□□□□ -1.01
PTCD3-201ENST00000254630 PRKAG1P54619 331 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 RAB14P61106 215 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 RALGDSQ12967 914 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 ABHD15Q6UXT9 468 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 LRRC74BQ6ZQY2 392 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 EIF3MQ7L2H7 374 aaKnown RBP8.77□□□□□ -1.01
PTCD3-201ENST00000254630 CDRT15Q96T59 188 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 CEP44Q9C0F1 390 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 ACP6Q9NPH0 428 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 NDUFA13Q9P0J0 144 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 GMIPQ9P107 970 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 PCDHGC5Q9Y5F6 944 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 N6AMT1Q9Y5N5 214 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 CACNB4O00305 520 aaPredicted RBP8.77□□□□□ -1.01
PTCD3-201ENST00000254630 OPLAHO14841 1288 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 FFAR3O14843 346 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 GPR42O15529 346 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 DCXO43602 365 aa8.77□□□□□ -1.01
PTCD3-201ENST00000254630 ITGB3BPQ13352 177 aaPredicted RBP8.77□□□□□ -1.01
PTCD3-201ENST00000254630 KCNA10Q16322 511 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms