RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 TCAF2A6NFQ2 919 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 CASTOR2A6NHX0 329 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 PGK1P00558 417 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 SLC35E2BP0CK96 405 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 HSPA8P11142 646 aaKnown RBP12.08□□□□□ -0.48
USHBP1-201ENST00000252597 CDH2P19022 906 aaPredicted RBP12.08□□□□□ -0.48
USHBP1-201ENST00000252597 GLDCP23378 1020 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 C1QTNF8P60827 252 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 RAB10P61026 200 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 CCNA1P78396 465 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 ECT2LQ008S8 904 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 YWHAHQ04917 246 aaPredicted RBP12.08□□□□□ -0.48
USHBP1-201ENST00000252597 STX5Q13190 355 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 IKBKEQ14164 716 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 TRIM25Q14258 630 aaKnown RBP12.08□□□□□ -0.48
USHBP1-201ENST00000252597 INSCQ1MX18 579 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 C9orf57Q5W0N0 161 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 REP15Q6BDI9 236 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 ZFP1Q6P2D0 407 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 PIM3Q86V86 326 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 ZC3HC1Q86WB0 502 aaKnown RBP12.08□□□□□ -0.48
USHBP1-201ENST00000252597 TNIP3Q96KP6 325 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 B3GALT6Q96L58 329 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 SENP6Q9GZR1 1112 aaPredicted RBP12.08□□□□□ -0.48
USHBP1-201ENST00000252597 ZBTB26Q9HCK0 441 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 TNFRSF12AQ9NP84 129 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 HSFX1Q9UBD0 423 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 RAB26Q9ULW5 256 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 PHF24Q9UPV7 400 aa12.08□□□□□ -0.48
USHBP1-201ENST00000252597 A0A1W2PPW3 197 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 CABYRO75952 493 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 ALDH1A2O94788 518 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 LRIG2O94898 1065 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 MLNP12872 115 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 FUT4P22083 530 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 SH3BGRP55822 239 aaPredicted RBP12.07□□□□□ -0.48
USHBP1-201ENST00000252597 GRIK4Q16099 956 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 CYP51A1Q16850 503 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 NAPEPLDQ6IQ20 393 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 OGFOD2Q6N063 350 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 ZYG11AQ6WRX3 759 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 SCN4BQ8IWT1 228 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 DDI1Q8WTU0 396 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 KCNA7Q96RP8 456 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 MTG1Q9BT17 334 aaPredicted RBP12.07□□□□□ -0.48
USHBP1-201ENST00000252597 ING2Q9H160 280 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 MKS1Q9NXB0 559 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 TIMM22Q9Y584 194 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 H3BMM5 538 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 SOCS2O14508 198 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 CLOCKO15516 846 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 KCNH1O95259 989 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 LINC00032P0C843 101 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 MAP4P27816 1152 aaKnown RBP12.07□□□□□ -0.48
USHBP1-201ENST00000252597 CD68P34810 354 aaPredicted RBP12.07□□□□□ -0.48
USHBP1-201ENST00000252597 SLC1A2P43004 574 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 PTPN9P43378 593 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 TAF6P49848 677 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 INCA1Q0VD86 236 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 BNIP3Q12983 259 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 SLC44A4Q53GD3 710 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 GPR158Q5T848 1215 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 CUZD1Q86UP6 607 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 PPHLN1Q8NEY8 458 aaKnown RBP12.07□□□□□ -0.48
USHBP1-201ENST00000252597 VPS33AQ96AX1 596 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 EVLQ9UI08 416 aaPredicted RBP12.07□□□□□ -0.48
USHBP1-201ENST00000252597 RNF11Q9Y3C5 154 aa12.07□□□□□ -0.48
USHBP1-201ENST00000252597 MYBPHLA2RUH7 354 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 B4GAT1O43505 415 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 GAS2O43903 313 aaKnown RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 ZBTB11O95625 1053 aaPredicted RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 GABRB3P28472 473 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 NOS2P35228 1153 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 PLA2G4EQ3MJ16 856 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 GRAMD4Q6IC98 578 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 OSTM1Q86WC4 334 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 C1orf50Q9BV19 199 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 RHOJQ9H4E5 214 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 MID1IP1Q9NPA3 183 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 SPAG4Q9NPE6 437 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 FBXO5Q9UKT4 447 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 CNOT6Q9ULM6 557 aaKnown RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 BRCA1P38398 1863 aaKnown RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 MEIS3P2A8K0S8 358 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 HACD1B0YJ81 288 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 H6PDO95479 791 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 SNRPB2P08579 225 aaKnown RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 CD151P48509 253 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 LSM3P62310 102 aaKnown RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 XIAPP98170 497 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 SOX4Q06945 474 aaPredicted RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 PFKFB4Q16877 469 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 METTL21CQ5VZV1 264 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 NEPROQ6NW34 567 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 DNAJC14Q6Y2X3 702 aaPredicted RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 GPRIN1Q7Z2K8 1008 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 SETD3Q86TU7 594 aaPredicted RBP12.06□□□□□ -0.48
USHBP1-201ENST00000252597 RIOX2Q8IUF8 465 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 EXOC8Q8IYI6 725 aa12.06□□□□□ -0.48
USHBP1-201ENST00000252597 CENPLQ8N0S6 344 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms