RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 IRGQQ8WZA9 623 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 SENP6Q9GZR1 1112 aaPredicted RBP25.78■■□□□ 1.72
RAB40C-201ENST00000248139 TREX1Q9NSU2 369 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 MYOCOSA0A1B0GUC4 107 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 TCAF2A6NFQ2 919 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 PDK3Q15120 406 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 TLR1Q15399 786 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 C2CD4AQ8NCU7 369 aaPredicted RBP25.78■■□□□ 1.72
RAB40C-201ENST00000248139 ICA1LQ8NDH6 482 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 PABPC5Q96DU9 382 aaKnown RBP25.78■■□□□ 1.72
RAB40C-201ENST00000248139 PKMYT1Q99640 499 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 IGSF5Q9NSI5 407 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 KCTD3Q9Y597 815 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 AHCYL1O43865 530 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 GEMP55040 296 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 C1QTNF8P60827 252 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 DCUN1D1Q96GG9 259 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 KLHL32Q96NJ5 620 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 NOL6Q9H6R4 1146 aaKnown RBP25.77■■□□□ 1.72
RAB40C-201ENST00000248139 GIT1Q9Y2X7 761 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 ATP6AP2A0A1C7CYW4 349 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 UNCXA6NJT0 531 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 ATP6AP2O75787 350 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 PGM3O95394 542 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 CCDC166P0CW27 439 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 HAPLN1P10915 354 aaPredicted RBP25.77■■□□□ 1.72
RAB40C-201ENST00000248139 PTPRCAPQ14761 206 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 GALNT4Q8N4A0 578 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 ABI2Q9NYB9 513 aaPredicted RBP25.77■■□□□ 1.72
RAB40C-201ENST00000248139 ADA2Q9NZK5 511 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 PSMD13Q9UNM6 376 aa25.77■■□□□ 1.72
RAB40C-201ENST00000248139 PSMD3O43242 534 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 B4GALT3O60512 393 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 CNTN5O94779 1100 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 CD86P42081 329 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 SULT2A1Q06520 285 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 SLC10A7Q0GE19 358 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 TAF1CQ15572 869 aaPredicted RBP25.76■■□□□ 1.71
RAB40C-201ENST00000248139 DDR2Q16832 855 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 MANEALQ5VSG8 457 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 POTEHQ6S545 545 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 CPSF7Q8N684 471 aaKnown RBP25.76■■□□□ 1.71
RAB40C-201ENST00000248139 RSPH1Q8WYR4 309 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 PCDHAC1Q9H158 963 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 CATSPERBQ9H7T0 1116 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 TBX18O95935 607 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 RPL9P32969 192 aaKnown RBP25.76■■□□□ 1.71
RAB40C-201ENST00000248139 KCNC1P48547 511 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 PIK3R6Q5UE93 754 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 LAYNQ6UX15 382 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 PIM3Q86V86 326 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 ENTPD7Q9NQZ7 604 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 ABCC13Q9NSE7 274 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 NCKIPSDQ9NZQ3 722 aa25.76■■□□□ 1.71
RAB40C-201ENST00000248139 OR6B1O95007 311 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 ETFBP38117 255 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 DSC2Q02487 901 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 OGFRL1Q5TC84 451 aaPredicted RBP25.75■■□□□ 1.71
RAB40C-201ENST00000248139 CLEC6AQ6EIG7 209 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 SPATA2LQ8IUW3 424 aaPredicted RBP25.75■■□□□ 1.71
RAB40C-201ENST00000248139 OR6P1Q8NGX9 317 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 HMGCLL1Q8TB92 370 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 EXT2Q93063 718 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 HAPLN3Q96S86 360 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 SERPINI1Q99574 410 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 PKP2Q99959 881 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 UBE2OQ9C0C9 1292 aaKnown RBP25.75■■□□□ 1.71
RAB40C-201ENST00000248139 CCDC167Q9P0B6 97 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 ARSDP51689 593 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 SLC39A12Q504Y0 691 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 SPATA24Q86W54 205 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 CIR1Q86X95 450 aaPredicted RBP25.75■■□□□ 1.71
RAB40C-201ENST00000248139 KLHDC8BQ8IXV7 354 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 ADAM2Q99965 735 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 ZCWPW1Q9H0M4 648 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 VTI1BQ9UEU0 232 aa25.75■■□□□ 1.71
RAB40C-201ENST00000248139 PRPF19Q9UMS4 504 aaKnown RBP25.75■■□□□ 1.71
RAB40C-201ENST00000248139 CASQ2O14958 399 aaPredicted RBP25.74■■□□□ 1.71
RAB40C-201ENST00000248139 CNPY1Q3B7I2 92 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 LIN52Q52LA3 116 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 ALFQ53S48 1182 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 HMCESQ96FZ2 354 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 LRGUKQ96M69 825 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 TRAPPC9Q96Q05 1148 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 MRPL57Q9BQC6 102 aaKnown RBP25.74■■□□□ 1.71
RAB40C-201ENST00000248139 VCX3BQ9H321 246 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 EFCAB1Q9HAE3 211 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 TRPC7Q9HCX4 862 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 UBAP1Q9NZ09 502 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 CRYL1Q9Y2S2 319 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 A8MT66 165 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 AP3B1O00203 1094 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 COL6A2P12110 1019 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 RALGDSQ12967 914 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 PGAM4Q8N0Y7 254 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 C2orf69Q8N8R5 385 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 OR9I1Q8NGQ6 314 aa25.74■■□□□ 1.71
RAB40C-201ENST00000248139 GMPR2Q9P2T1 348 aaKnown RBP25.74■■□□□ 1.71
RAB40C-201ENST00000248139 TNFRSF10BO14763 440 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 SLC4A1P02730 911 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms