RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 STARD13Q9Y3M8 1113 aa13.9□□□□□ -0.18
SNRNP27-201ENST00000244227 USP15Q9Y4E8 981 aaPredicted RBP13.9□□□□□ -0.18
SNRNP27-201ENST00000244227 ATXN2Q99700 1313 aaKnown RBP13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 INSIG1O15503 277 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 TIMM44O43615 452 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 CLASP2O75122 1294 aaKnown RBP13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 PRLP01236 227 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 FGF1P05230 155 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 EPCAMP16422 314 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 TYK2P29597 1187 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 CSKP41240 450 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 CTBP1Q13363 440 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 GRM3Q14832 879 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 FAM109BQ6ICB4 259 aaPredicted RBP13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 C16orf46Q6P387 395 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 LINGO4Q6UY18 593 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 OTOAQ7RTW8 1153 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 TDRD5Q8NAT2 981 aaKnown RBP13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 TTC16Q8NEE8 873 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 RIN3Q8TB24 985 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 GRAMD1AQ96CP6 724 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 IFT43Q96FT9 208 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 EXOC2Q96KP1 924 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 GCNAQ96QF7 691 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 GPR22Q99680 433 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 RHOJQ9H4E5 214 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 ARHGAP26Q9UNA1 814 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 CCL26Q9Y258 94 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 KCTD3Q9Y597 815 aa13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 MTCL1Q9Y4B5 1905 aaKnown RBP13.89□□□□□ -0.19
SNRNP27-201ENST00000244227 MIA3Q5JRA6 1907 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 ANKRD65E5RJM6 399 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 GLRA3O75311 464 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 TMCC1O94876 653 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 RB1P06400 928 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 PTPN2P17706 415 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 BGNP21810 368 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 SCNN1BP51168 640 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 MPP1Q00013 466 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 GALNT3Q14435 633 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 TEAD2Q15562 447 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 DLG2Q15700 870 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 INSCQ1MX18 579 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 INO80DQ53TQ3 878 aaPredicted RBP13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 GPR158Q5T848 1215 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 FYB2Q5VWT5 728 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 CES4AQ5XG92 561 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 YTHDF3Q7Z739 585 aaKnown RBP13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 RNF135Q8IUD6 432 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 C2CD4AQ8NCU7 369 aaPredicted RBP13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 DDI1Q8WTU0 396 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 BHMTQ93088 406 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 NUDCD1Q96RS6 583 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 MECRQ9BV79 373 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 MTIF3Q9H2K0 278 aaKnown RBP13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 CAB39LQ9H9S4 337 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 DCDC2Q9UHG0 476 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 VPS51Q9UID3 782 aa13.88□□□□□ -0.19
SNRNP27-201ENST00000244227 TYW5A2RUC4 315 aaKnown RBP13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 KLF11O14901 512 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 NDST3O95803 873 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 RHOP08100 348 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 PAMP19021 973 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 CES1P23141 567 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 HOXA9P31269 272 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 SLC1A2P43004 574 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 SERPINB8P50452 374 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 ARSDP51689 593 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 ACVR1Q04771 509 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 CDH18Q13634 790 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 SLC5A9Q2M3M2 681 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 C9orf50Q5SZB4 431 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 MPP7Q5T2T1 576 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 N4BP2L1Q5TBK1 243 aaPredicted RBP13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 NEPROQ6NW34 567 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 KYAT3Q6YP21 454 aaKnown RBP13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 CLEC14AQ86T13 490 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 SRLQ86TD4 932 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 MFN1Q8IWA4 741 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 MFSD6LQ8IWD5 586 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 CMTM8Q8IZV2 173 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 APCDD1Q8J025 514 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 PLD6Q8N2A8 252 aaKnown RBP13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 TDRD1Q9BXT4 1180 aaKnown RBP13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 ZNF358Q9NW07 568 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 PLK2Q9NYY3 685 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 SIRPGQ9P1W8 387 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 LHX3Q9UBR4 397 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 VPS28Q9UK41 221 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 CHKBQ9Y259 395 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 DOCK6Q96HP0 2047 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 PLIN3O60664 434 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 MT-CO1P00395 513 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 C2P06681 752 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 BPGMP07738 259 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 NSUN2Q08J23 767 aaKnown RBP eCLIP13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 THOC5Q13769 683 aaKnown RBP13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 MPPE1Q53F39 396 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 TPGS1Q6ZTW0 290 aa13.87□□□□□ -0.19
SNRNP27-201ENST00000244227 ANKS4BQ8N8V4 417 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms