RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 EPN3Q9H201 632 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 LINC00597Q9H2U6 94 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 ABCB8Q9NUT2 735 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 NSMCE4AQ9NXX6 385 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 MARK1Q9P0L2 795 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 HELZP42694 1942 aaKnown RBP16.95■□□□□ 0.3
TVP23C-201ENST00000225576 BMP8BP34820 402 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 ARCN1P48444 511 aaKnown RBP16.95■□□□□ 0.3
TVP23C-201ENST00000225576 RHOAP61586 193 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 SEPT6Q14141 434 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 HSP90AA5PQ58FG0 334 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 TSTD2Q5T7W7 516 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 ESRP1Q6NXG1 681 aaKnown RBP16.95■□□□□ 0.3
TVP23C-201ENST00000225576 NCEH1Q6PIU2 408 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 PEX13Q92968 403 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 EXOC2Q96KP1 924 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 NSMCE3Q96MG7 304 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 BBS2Q9BXC9 721 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 IL1RAPL1Q9NZN1 696 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 INTS6Q9UL03 887 aaKnown RBP16.95■□□□□ 0.3
TVP23C-201ENST00000225576 PSAT1Q9Y617 370 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 MYO7AQ13402 2215 aa16.95■□□□□ 0.3
TVP23C-201ENST00000225576 DOCK6Q96HP0 2047 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 MROH6A6NGR9 719 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 SIN3BO75182 1162 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 RFPL1O75677 317 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 ZWINTO95229 277 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 MT-CO1P00395 513 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 CA4P22748 312 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 HLA-FP30511 346 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 CSNK1DP48730 415 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 CSE1LP55060 971 aaKnown RBP16.94■□□□□ 0.3
TVP23C-201ENST00000225576 PITRM1Q5JRX3 1037 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 MROH9Q5TGP6 573 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 CNTN4Q8IWV2 1026 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 AGAP2Q99490 1192 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 TDRD1Q9BXT4 1180 aaKnown RBP16.94■□□□□ 0.3
TVP23C-201ENST00000225576 SLC2A11Q9BYW1 496 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 SLC17A6Q9P2U8 582 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 RIMKLBQ9ULI2 386 aa16.94■□□□□ 0.3
TVP23C-201ENST00000225576 FCF1Q9Y324 198 aaKnown RBP16.94■□□□□ 0.3
TVP23C-201ENST00000225576 GMNCA6NCL1 334 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 NEDD8-MDP1E9PL57 170 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 TM9SF1O15321 606 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 VAPBO95292 243 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 PRLP01236 227 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 ITGA2BP08514 1039 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 PYGBP11216 843 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 FSHRP23945 695 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 ARNTP27540 789 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 RPA3P35244 121 aaPredicted RBP16.93■□□□□ 0.3
TVP23C-201ENST00000225576 SPRP35270 261 aaPredicted RBP16.93■□□□□ 0.3
TVP23C-201ENST00000225576 CCNFP41002 786 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 AP1S1P61966 158 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 BMPR2Q13873 1038 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 DMC1Q14565 340 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 CNGA3Q16281 694 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 LY6G5CQ5SRR4 150 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 STRA8Q7Z7C7 330 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 GPR149Q86SP6 731 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 SRLQ86TD4 932 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 MGARPQ8TDB4 240 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 BRSK1Q8TDC3 778 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 ACMSDQ8TDX5 336 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 APOPT1Q96IL0 206 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 KLF6Q99612 283 aaPredicted RBP16.93■□□□□ 0.3
TVP23C-201ENST00000225576 RBBP8Q99708 897 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 MCMBPQ9BTE3 642 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 IARS2Q9NSE4 1012 aaKnown RBP16.93■□□□□ 0.3
TVP23C-201ENST00000225576 MKS1Q9NXB0 559 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 SLC2A6Q9UGQ3 507 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 CHKBQ9Y259 395 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 RAI2Q9Y5P3 530 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 WNT6Q9Y6F9 365 aa16.93■□□□□ 0.3
TVP23C-201ENST00000225576 CCDC78A2IDD5 438 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 GOLGA8RI6L899 631 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 RFXAPO00287 272 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 LDB2O43679 373 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 ASMTLO95671 621 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 TYRP14679 529 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 MAPK8P45983 427 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 LIMK2P53671 638 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 WDR4P57081 412 aaKnown RBP16.92■□□□□ 0.3
TVP23C-201ENST00000225576 GALNT3Q14435 633 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 LRRC14Q15048 493 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 RARS2Q5T160 578 aaKnown RBP16.92■□□□□ 0.3
TVP23C-201ENST00000225576 RNF135Q8IUD6 432 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 NPAS3Q8IXF0 933 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 DYDC1Q8WWB3 177 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 CKAP2Q8WWK9 683 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 TIFAQ96CG3 184 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 LRRC3BQ96PB8 259 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 ADGRE3Q9BY15 652 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 IGFLR1Q9H665 355 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 GDE1Q9NZC3 331 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 GGA2Q9UJY4 613 aa16.92■□□□□ 0.3
TVP23C-201ENST00000225576 RANBP2P49792 3224 aaKnown RBP16.92■□□□□ 0.3
TVP23C-201ENST00000225576 K7ERQ8 282 aa16.91■□□□□ 0.3
TVP23C-201ENST00000225576 SMAD6O43541 496 aaKnown RBP16.91■□□□□ 0.3
TVP23C-201ENST00000225576 PABPC1P11940 636 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms