RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 CALCOCO2Q13137 446 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 C2orf27AQ580R0 203 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 ZNF534Q76KX8 674 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 SIX5Q8N196 739 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 CHST14Q8NCH0 376 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 FBXO25Q8TCJ0 367 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 ECHDC3Q96DC8 303 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 ZNF641Q96N77 438 aaPredicted RBP14.19□□□□□ -0.14
SEC61B-201ENST00000223641 HEPHQ9BQS7 1158 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 TDRD1Q9BXT4 1180 aaKnown RBP14.19□□□□□ -0.14
SEC61B-201ENST00000223641 LRRC40Q9H9A6 602 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 PRSS16Q9NQE7 514 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 ANAPC5Q9UJX4 755 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 RAB21Q9UL25 225 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 NDRG2Q9UN36 371 aaKnown RBP14.19□□□□□ -0.14
SEC61B-201ENST00000223641 RAI2Q9Y5P3 530 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 WASF2Q9Y6W5 498 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 E7EVH7 732 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 PMPCBO75439 489 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 EPHX1P07099 455 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 TUBBP07437 444 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 CTSLP07711 333 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 MLNP12872 115 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 GKP32189 559 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 MAGEA3P43357 314 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 TRAF2Q12933 501 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 ELAVL3Q14576 367 aaKnown RBP14.18□□□□□ -0.14
SEC61B-201ENST00000223641 DENND5AQ6IQ26 1287 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 CAND1Q86VP6 1230 aaKnown RBP14.18□□□□□ -0.14
SEC61B-201ENST00000223641 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.18□□□□□ -0.14
SEC61B-201ENST00000223641 TMIEQ8NEW7 156 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 OR6K2Q8NGY2 324 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 HCAR2Q8TDS4 363 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 FEM1CQ96JP0 617 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 FRMD8Q9BZ67 464 aaPredicted RBP14.18□□□□□ -0.14
SEC61B-201ENST00000223641 NEUROG2Q9H2A3 272 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 SUV39H2Q9H5I1 410 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 ATP13A3Q9H7F0 1226 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 CASS4Q9NQ75 786 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 PPM1HQ9ULR3 514 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 MTF2Q9Y483 593 aaPredicted RBP14.18□□□□□ -0.14
SEC61B-201ENST00000223641 PCDHGC4Q9Y5F7 938 aa14.18□□□□□ -0.14
SEC61B-201ENST00000223641 A0A1W2PQF6 199 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 ATXN1LP0C7T5 689 aaKnown RBP14.17□□□□□ -0.14
SEC61B-201ENST00000223641 SERPINA4P29622 427 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 GRIA1P42261 906 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 PLTPP55058 493 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 CDK18Q07002 472 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 BCL2L1Q07817 233 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 SIGLEC14Q08ET2 396 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 MSLNQ13421 630 aaPredicted RBP14.17□□□□□ -0.14
SEC61B-201ENST00000223641 OLIG2Q13516 323 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 LRRC32Q14392 662 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 SYCP2LQ5T4T6 812 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 NAPEPLDQ6IQ20 393 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 SDE2Q6IQ49 451 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 LRRC8BQ6P9F7 803 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 GDPD4Q6W3E5 623 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 CCNI2Q6ZMN8 369 aaPredicted RBP14.17□□□□□ -0.14
SEC61B-201ENST00000223641 LINC00523Q86TU6 105 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 CAMK1DQ8IU85 385 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 STK40Q8N2I9 435 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 TXNDC5Q8NBS9 432 aaKnown RBP14.17□□□□□ -0.14
SEC61B-201ENST00000223641 IPMKQ8NFU5 416 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 RPLP0P6Q8NHW5 317 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.17□□□□□ -0.14
SEC61B-201ENST00000223641 OR8D1Q8WZ84 308 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 EDAQ92838 391 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 CLDN23Q96B33 292 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 SERPINB12Q96P63 405 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 TBL1YQ9BQ87 522 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 OSBPL1AQ9BXW6 950 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 PARD6BQ9BYG5 372 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 FOXP3Q9BZS1 431 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 PHACTR1Q9C0D0 580 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 RSPH9Q9H1X1 276 aaPredicted RBP14.17□□□□□ -0.14
SEC61B-201ENST00000223641 FBRSQ9HAH7 460 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 LMAN1LQ9HAT1 526 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 IL36AQ9UHA7 158 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 MMP17Q9ULZ9 603 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 PPIL1Q9Y3C6 166 aa14.17□□□□□ -0.14
SEC61B-201ENST00000223641 A0A1W2PQ67 120 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 TSPAN11A1L157 253 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 FAM170BA6NMN3 283 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 BNIP3LO60238 219 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 PPFIA2O75334 1257 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 LEFTY1O75610 366 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 PGLSO95336 258 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 PIGNO95427 931 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 KLF8O95600 359 aaPredicted RBP14.16□□□□□ -0.14
SEC61B-201ENST00000223641 NDST3O95803 873 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 AGTP01019 485 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 PRNPP04156 253 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 PDHA1P08559 390 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 MYBL2P10244 700 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 HLA-DPA1P20036 260 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 CA4P22748 312 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 MCM3P25205 808 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 WASP42768 502 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 COPAP53621 1224 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms