RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 MLLT6P55198 1093 aaPredicted RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 WNT3AP56704 352 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 DSC1Q08554 894 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 MS4A13Q5J8X5 152 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 TMEM240Q5SV17 173 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 ZNF470Q6ECI4 717 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 NAPEPLDQ6IQ20 393 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 FUT10Q6P4F1 479 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 RGS9BPQ6ZS82 235 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 CCNYL1Q8N7R7 359 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 PPP4R1Q8TF05 950 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 MTBPQ96DY7 904 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 PGAP3Q96FM1 320 aaPredicted RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 PATJQ8NI35 1801 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 A0A0D9SEW6 157 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 NEMP2A6NFY4 417 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 NCAM2O15394 837 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 GYG2O15488 501 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 TLR5O60602 858 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 AHSGP02765 367 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 SKIP12755 728 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 CPA3P15088 417 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 SPRP35270 261 aaPredicted RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 HOXD12P35452 270 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 PCLAFQ15004 111 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 SPANXN3Q5MJ09 141 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 STEAP4Q687X5 459 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 KCTD11Q693B1 232 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 CNKSR3Q6P9H4 555 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 RYBPQ8N488 228 aaPredicted RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 SHKBP1Q8TBC3 707 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 DTX3LQ8TDB6 740 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 PDCD6IPQ8WUM4 868 aaKnown RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 IRGQQ8WZA9 623 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 BADQ92934 168 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 MCUR1Q96AQ8 359 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 MIPEPQ99797 713 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 GDF15Q99988 308 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 NOL6Q9H6R4 1146 aaKnown RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 IL23AQ9NPF7 189 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 ARHGEF3Q9NR81 526 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 RRN3Q9NYV6 651 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 NEU3Q9UQ49 428 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 PRR5-ARHGAP8B1AHC4 643 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 HNRNPRO43390 633 aaKnown RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 MGRN1O60291 552 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 ALDH1A2O94788 518 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 GJB5O95377 273 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 CHRNGP07510 517 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 RALBP11234 206 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 TSPAN8P19075 237 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 GLDCP23378 1020 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 GABRB3P28472 473 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 RPS24P62847 133 aaKnown RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 ARHGAP8P85298 464 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 GALNT3Q14435 633 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 IHHQ14623 411 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 TAF12Q16514 161 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 NFE2Q16621 373 aaPredicted RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 NAPRTQ6XQN6 538 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 LGI2Q8N0V4 545 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 SIX5Q8N196 739 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 OR7D4Q8NG98 312 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 BLOC1S5Q8TDH9 187 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 ELMO2Q96JJ3 720 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 MARK4Q96L34 752 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 SERPINB11Q96P15 392 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 RBBP8Q99708 897 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 SLC39A3Q9BRY0 314 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 CYP4F11Q9HBI6 524 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 ARHGEF38Q9NXL2 777 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 NKX1-2Q9UD57 310 aaPredicted RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 TLK1Q9UKI8 766 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 TRHDEQ9UKU6 1024 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 RUVBL2Q9Y230 463 aaKnown RBP10.07□□□□□ -0.8
USP11-201ENST00000218348 WDR37Q9Y2I8 494 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 A0A1W2PQ67 120 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 MTMR11A4FU01 709 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.06□□□□□ -0.8
USP11-201ENST00000218348 B2RBV5 119 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 E9PBE3 544 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 KLHL41O60662 606 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 GLRA3O75311 464 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 EOMESO95936 686 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 GSRP00390 522 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 MT-CO1P00395 513 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 CD1EP15812 388 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 TYMPP19971 482 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 PSMD7P51665 324 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 COG7P83436 770 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 THOC5Q13769 683 aaKnown RBP10.06□□□□□ -0.8
USP11-201ENST00000218348 FBXO48Q5FWF7 155 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 ASRGL1Q7L266 308 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 TMEM135Q86UB9 458 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 HIPK4Q8NE63 616 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 HERVK_113Q902F9 699 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 UROC1Q96N76 676 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 CASD1Q96PB1 797 aa10.06□□□□□ -0.8
USP11-201ENST00000218348 CPNE1Q99829 537 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms