RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 COPS7BQ9H9Q2 264 aaPredicted RBP13.27□□□□□ -0.29
CTNS-201ENST00000046640 RNF186Q9NXI6 227 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 DSEQ9UL01 958 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 ARHGAP26Q9UNA1 814 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 MTF2Q9Y483 593 aaPredicted RBP13.27□□□□□ -0.29
CTNS-201ENST00000046640 DTNAQ9Y4J8 743 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 TMEM233B4DJY2 109 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 TRPA1O75762 1119 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 MPOP05164 745 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 JUNP05412 331 aaKnown RBP13.26□□□□□ -0.29
CTNS-201ENST00000046640 SBK3P0C264 359 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 ARSAP15289 507 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 ALDH1A3P47895 512 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 ARL13AQ5H913 290 aaPredicted RBP13.26□□□□□ -0.29
CTNS-201ENST00000046640 AAGABQ6PD74 315 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 CLEC14AQ86T13 490 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 LINC00523Q86TU6 105 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 HMCESQ96FZ2 354 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 MRGPRX2Q96LB1 330 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 CATSPER2Q96P56 530 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 SMOC2Q9H3U7 446 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 CYP4F12Q9HCS2 524 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 XPR1Q9UBH6 696 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 ADAM28Q9UKQ2 775 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 PCDHB12Q9Y5F1 795 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 ZNF236Q9UL36 1845 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 FAM95CA0A1B0GW59 222 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 TADA2AO75478 443 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 PIGNO95427 931 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 SLC10A3P09131 477 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 PMLP29590 882 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 CD86P42081 329 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 MAGEA12P43365 314 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 HARS2P49590 506 aaKnown RBP13.26□□□□□ -0.29
CTNS-201ENST00000046640 PLK1P53350 603 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 WNT3AP56704 352 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 DSC2Q02487 901 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 MBTPS1Q14703 1052 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 MAPRE1Q15691 268 aaKnown RBP13.26□□□□□ -0.29
CTNS-201ENST00000046640 PDCD2Q16342 344 aaPredicted RBP13.26□□□□□ -0.29
CTNS-201ENST00000046640 RBM20Q5T481 1227 aaKnown RBP13.26□□□□□ -0.29
CTNS-201ENST00000046640 RAP1GAP2Q684P5 730 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 CNSTQ6PJW8 725 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 CENPLQ8N0S6 344 aaPredicted RBP13.26□□□□□ -0.29
CTNS-201ENST00000046640 PPHLN1Q8NEY8 458 aaKnown RBP13.26□□□□□ -0.29
CTNS-201ENST00000046640 PSMG2Q969U7 264 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 TSNARE1Q96NA8 513 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 HAPLN3Q96S86 360 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 CDH19Q9H159 772 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 NOL6Q9H6R4 1146 aaKnown RBP13.26□□□□□ -0.29
CTNS-201ENST00000046640 TMEM88BA6NKF7 163 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 ANXA9O76027 345 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 TAS2R39P59534 338 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 EIF4EBP2Q13542 120 aaPredicted RBP13.26□□□□□ -0.29
CTNS-201ENST00000046640 PTPRCAPQ14761 206 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 TLR1Q15399 786 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 PGM2L1Q6PCE3 622 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 KLHDC9Q8NEP7 349 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 EZH1Q92800 747 aaPredicted RBP13.26□□□□□ -0.29
CTNS-201ENST00000046640 FCRL5Q96RD9 977 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 IL12RB2Q99665 862 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 GPR22Q99680 433 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 RHOJQ9H4E5 214 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 OXSMQ9NWU1 459 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 ACTL7AQ9Y615 435 aa13.26□□□□□ -0.29
CTNS-201ENST00000046640 C15orf38-AP3S2A0A0A6YYH1 394 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 OR51F1A6NGY5 319 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 FAM155AB1AL88 458 aaPredicted RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 H3BNX3 289 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 PIRTP0C851 137 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 CKBP12277 381 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 NELFEP18615 380 aaKnown RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 MLLT6P55198 1093 aaPredicted RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 CSHL1Q14406 222 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 IHHQ14623 411 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 BRMS1LQ5PSV4 323 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 FAM171A1Q5VUB5 890 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 ARPINQ7Z6K5 226 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 ZNF598Q86UK7 904 aaKnown RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 SPATA24Q86W54 205 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 TMEM151AQ8N4L1 468 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 RTL3Q8N8U3 475 aaKnown RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 TMA16Q96EY4 203 aaKnown RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 MPP4Q96JB8 637 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 FAM193BQ96PV7 902 aaPredicted RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 SEPT5Q99719 369 aaPredicted RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 TCF7L2Q9NQB0 619 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 DDX18Q9NVP1 670 aaKnown RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 DNAJC28Q9NX36 388 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 ZDHHC2Q9UIJ5 367 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 SORCS3Q9UPU3 1222 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 ACOT9Q9Y305 439 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 KCTD3Q9Y597 815 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 TDRD15B5MCY1 1934 aaKnown RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 CA12O43570 354 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 HNRNPLP14866 589 aaKnown RBP eCLIP13.25□□□□□ -0.29
CTNS-201ENST00000046640 XRCC1P18887 633 aaPredicted RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 RANBP1P43487 201 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 ARCN1P48444 511 aaKnown RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 CSE1LP55060 971 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms