RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 CXorf40BQ96DE9 158 aa23.34■■□□□ 1.33
TARBP1-201ENST00000040877 MAML3Q96JK9 1138 aa23.34■■□□□ 1.33
TARBP1-201ENST00000040877 LEF1Q9UJU2 399 aaPredicted RBP23.34■■□□□ 1.33
TARBP1-201ENST00000040877 URADA6NGE7 173 aa23.33■■□□□ 1.33
TARBP1-201ENST00000040877 PDE5AO76074 875 aa23.33■■□□□ 1.33
TARBP1-201ENST00000040877 XYLT1Q86Y38 959 aa23.33■■□□□ 1.33
TARBP1-201ENST00000040877 IRF2BP1Q8IU81 584 aa23.33■■□□□ 1.33
TARBP1-201ENST00000040877 ARMCX1Q9P291 453 aa23.33■■□□□ 1.33
TARBP1-201ENST00000040877 TPRKBQ9Y3C4 175 aa23.33■■□□□ 1.33
TARBP1-201ENST00000040877 MRPL42Q9Y6G3 142 aaKnown RBP23.33■■□□□ 1.33
TARBP1-201ENST00000040877 TK2O00142 265 aa23.33■■□□□ 1.33
TARBP1-201ENST00000040877 CLOCKO15516 846 aa23.33■■□□□ 1.33
TARBP1-201ENST00000040877 DNAJC14Q6Y2X3 702 aaPredicted RBP23.33■■□□□ 1.33
TARBP1-201ENST00000040877 SLC26A9Q7LBE3 791 aa23.33■■□□□ 1.33
TARBP1-201ENST00000040877 DDHD1Q8NEL9 900 aa23.33■■□□□ 1.33
TARBP1-201ENST00000040877 SYN3O14994 580 aa23.33■■□□□ 1.32
TARBP1-201ENST00000040877 NDUFS2O75306 463 aa23.33■■□□□ 1.32
TARBP1-201ENST00000040877 CLK2P49760 499 aaKnown RBP23.33■■□□□ 1.32
TARBP1-201ENST00000040877 POU5F1Q01860 360 aaKnown RBP23.33■■□□□ 1.32
TARBP1-201ENST00000040877 MPPE1Q53F39 396 aa23.33■■□□□ 1.32
TARBP1-201ENST00000040877 ZDHHC13Q8IUH4 622 aa23.33■■□□□ 1.32
TARBP1-201ENST00000040877 RASGEF1CQ8N431 466 aa23.33■■□□□ 1.32
TARBP1-201ENST00000040877 GDPD5Q8WTR4 605 aa23.33■■□□□ 1.32
TARBP1-201ENST00000040877 TRMOQ9BU70 441 aa23.33■■□□□ 1.32
TARBP1-201ENST00000040877 SNX3O60493 162 aa23.33■■□□□ 1.32
TARBP1-201ENST00000040877 TPSB2P20231 275 aa23.33■■□□□ 1.32
TARBP1-201ENST00000040877 NOS3P29474 1203 aa23.33■■□□□ 1.32
TARBP1-201ENST00000040877 TPSAB1Q15661 275 aa23.33■■□□□ 1.32
TARBP1-201ENST00000040877 PTCD2Q8WV60 388 aaKnown RBP23.33■■□□□ 1.32
TARBP1-201ENST00000040877 A0A0G2JLL6 359 aaPredicted RBP23.32■■□□□ 1.32
TARBP1-201ENST00000040877 HDAC3O15379 428 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 GRIA4P48058 902 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 PRRT2Q7Z6L0 340 aaPredicted RBP23.32■■□□□ 1.32
TARBP1-201ENST00000040877 MFSD1Q9H3U5 465 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 PROCP04070 461 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 GABRB2P47870 512 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 SDHAF4Q5VUM1 108 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 SNX30Q5VWJ9 437 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 LIPMQ5VYY2 423 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 RNF43Q68DV7 783 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 ARHGAP17Q68EM7 881 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 ADHFE1Q8IWW8 467 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 CLEC4DQ8WXI8 215 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 TPD52L3Q96J77 140 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 COPG2Q9UBF2 871 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 NFAT5O94916 1531 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 GRM6O15303 877 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 IL1BP01584 269 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 TAF10Q12962 218 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 GSTA3Q16772 222 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 STK32CQ86UX6 486 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 PCDHB18PQ96TA0 734 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 SEPT4O43236 478 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 TREHO43280 583 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 BUD23O43709 281 aaKnown RBP23.32■■□□□ 1.32
TARBP1-201ENST00000040877 KIAA1324Q6UXG2 1013 aaKnown RBP23.32■■□□□ 1.32
TARBP1-201ENST00000040877 GPRIN3Q6ZVF9 776 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 RMND5BQ96G75 393 aaPredicted RBP23.32■■□□□ 1.32
TARBP1-201ENST00000040877 ACBD6Q9BR61 282 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 ANAPC2Q9UJX6 822 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 GGA2Q9UJY4 613 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 LRCH1Q9Y2L9 728 aa23.32■■□□□ 1.32
TARBP1-201ENST00000040877 FAM20BO75063 409 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 PAICSP22234 425 aaKnown RBP23.31■■□□□ 1.32
TARBP1-201ENST00000040877 ABCG1P45844 678 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 TEX44Q53QW1 395 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 TTMPQ5BVD1 217 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 STK32AQ8WU08 396 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 CD101Q93033 1021 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 CPXM1Q96SM3 734 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 RWDD3Q9Y3V2 267 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 MEI4A8MW99 385 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 SNRPB2P08579 225 aaKnown RBP23.31■■□□□ 1.32
TARBP1-201ENST00000040877 PAX7P23759 505 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 PTP4A2Q12974 167 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 DUSP4Q13115 394 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 OTUD3Q5T2D3 398 aaPredicted RBP23.31■■□□□ 1.32
TARBP1-201ENST00000040877 CSPG4P5Q96PW8 444 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 KLHL3Q9UH77 587 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 MOXD2PA6NHM9 499 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 NDUFB5O43674 189 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 SHBGP04278 402 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 RHOQP17081 205 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 PTPN9P43378 593 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 ALFQ53S48 1182 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 LUZP2Q86TE4 346 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 COLGALT2Q8IYK4 626 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 ALG3Q92685 438 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 GTF2A1LQ9UNN4 478 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 TALDO1P37837 337 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 SH3BP5LQ7L8J4 393 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 SPATA5L1Q9BVQ7 753 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 RHOJQ9H4E5 214 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 MTF2Q9Y483 593 aaPredicted RBP23.31■■□□□ 1.32
TARBP1-201ENST00000040877 KCNE2Q9Y6J6 123 aa23.31■■□□□ 1.32
TARBP1-201ENST00000040877 CBX6O95503 412 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 KELP23276 732 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 POLD2P49005 469 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 ZNHIT3Q15649 155 aaPredicted RBP23.3■■□□□ 1.32
TARBP1-201ENST00000040877 KCNA10Q16322 511 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms