RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 MAGEA3P43357 314 aa22.3■■□□□ 1.16
HOXC8-201ENST00000040584 ELF3P78545 371 aaPredicted RBP22.3■■□□□ 1.16
HOXC8-201ENST00000040584 FCHO2Q0JRZ9 810 aa22.3■■□□□ 1.16
HOXC8-201ENST00000040584 PRPSAP1Q14558 356 aa22.3■■□□□ 1.16
HOXC8-201ENST00000040584 ZNF235Q14590 738 aa22.3■■□□□ 1.16
HOXC8-201ENST00000040584 FASTKD3Q14CZ7 662 aaKnown RBP22.3■■□□□ 1.16
HOXC8-201ENST00000040584 HP1BP3Q5SSJ5 553 aaPredicted RBP22.3■■□□□ 1.16
HOXC8-201ENST00000040584 KCTD11Q693B1 232 aa22.3■■□□□ 1.16
HOXC8-201ENST00000040584 PYROXD1Q8WU10 500 aa22.3■■□□□ 1.16
HOXC8-201ENST00000040584 ATP2A3Q93084 1043 aa22.3■■□□□ 1.16
HOXC8-201ENST00000040584 ELSPBP1Q96BH3 223 aa22.3■■□□□ 1.16
HOXC8-201ENST00000040584 RPP25Q9BUL9 199 aaKnown RBP22.3■■□□□ 1.16
HOXC8-201ENST00000040584 C2orf49Q9BVC5 232 aaPredicted RBP22.3■■□□□ 1.16
HOXC8-201ENST00000040584 GRXCR2A6NFK2 248 aa22.29■■□□□ 1.16
HOXC8-201ENST00000040584 ERI2A8K979 691 aaKnown RBP22.29■■□□□ 1.16
HOXC8-201ENST00000040584 POC1B-GALNT4F8VUJ3 575 aa22.29■■□□□ 1.16
HOXC8-201ENST00000040584 ATP5HO75947 161 aa22.29■■□□□ 1.16
HOXC8-201ENST00000040584 NFATC1O95644 943 aa22.29■■□□□ 1.16
HOXC8-201ENST00000040584 AP2A1O95782 977 aa22.29■■□□□ 1.16
HOXC8-201ENST00000040584 OLIG2Q13516 323 aa22.29■■□□□ 1.16
HOXC8-201ENST00000040584 CYTH1Q15438 398 aa22.29■■□□□ 1.16
HOXC8-201ENST00000040584 SKIV2LQ15477 1246 aaKnown RBP22.29■■□□□ 1.16
HOXC8-201ENST00000040584 PITRM1Q5JRX3 1037 aa22.29■■□□□ 1.16
HOXC8-201ENST00000040584 ALKBH8Q96BT7 664 aaKnown RBP22.29■■□□□ 1.16
HOXC8-201ENST00000040584 HPS4Q9NQG7 708 aa22.29■■□□□ 1.16
HOXC8-201ENST00000040584 SEPT3Q9UH03 358 aa22.29■■□□□ 1.16
HOXC8-201ENST00000040584 GJB3O75712 270 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 MT-CO1P00395 513 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 PLK1P53350 603 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 DSC2Q02487 901 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 NIPAL4Q0D2K0 466 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 SLC12A1Q13621 1099 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 RFTN1Q14699 578 aaPredicted RBP22.28■■□□□ 1.16
HOXC8-201ENST00000040584 PDGFRLQ15198 375 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 FUT11Q495W5 492 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 YAF2Q8IY57 180 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 WDR83Q9BRX9 315 aaKnown RBP22.28■■□□□ 1.16
HOXC8-201ENST00000040584 CINPQ9BW66 212 aaPredicted RBP22.28■■□□□ 1.16
HOXC8-201ENST00000040584 SLC25A51Q9H1U9 297 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 XAB2Q9HCS7 855 aaKnown RBP22.28■■□□□ 1.16
HOXC8-201ENST00000040584 ABCF3Q9NUQ8 709 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 PRUNE2Q8WUY3 3088 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 HOXC11O43248 304 aaPredicted RBP22.28■■□□□ 1.16
HOXC8-201ENST00000040584 UBOX5O94941 541 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 ZWINTO95229 277 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 PABPC1P11940 636 aaKnown RBP22.28■■□□□ 1.16
HOXC8-201ENST00000040584 PSMC3P17980 439 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 SARNPP82979 210 aaKnown RBP22.28■■□□□ 1.16
HOXC8-201ENST00000040584 CCDC91Q7Z6B0 441 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 C12orf40Q86WS4 652 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 BBS5Q8N3I7 341 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 ACDQ96AP0 544 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 UBE2ZQ9H832 354 aaPredicted RBP22.28■■□□□ 1.16
HOXC8-201ENST00000040584 ECT2Q9H8V3 914 aa22.28■■□□□ 1.16
HOXC8-201ENST00000040584 PIH1D1Q9NWS0 290 aaKnown RBP22.28■■□□□ 1.16
HOXC8-201ENST00000040584 K7ERQ8 282 aa22.27■■□□□ 1.16
HOXC8-201ENST00000040584 USP12O75317 370 aa22.27■■□□□ 1.16
HOXC8-201ENST00000040584 TMCC1O94876 653 aa22.27■■□□□ 1.16
HOXC8-201ENST00000040584 MLNP12872 115 aa22.27■■□□□ 1.16
HOXC8-201ENST00000040584 WDR4P57081 412 aaKnown RBP22.27■■□□□ 1.16
HOXC8-201ENST00000040584 PDK4Q16654 411 aa22.27■■□□□ 1.16
HOXC8-201ENST00000040584 BBS9Q3SYG4 887 aa22.27■■□□□ 1.16
HOXC8-201ENST00000040584 PRPF39Q86UA1 669 aaKnown RBP22.27■■□□□ 1.16
HOXC8-201ENST00000040584 AGGF1Q8N302 714 aaeCLIP22.27■■□□□ 1.16
HOXC8-201ENST00000040584 ZNF557Q8N988 423 aaPredicted RBP22.27■■□□□ 1.16
HOXC8-201ENST00000040584 IMP4Q96G21 291 aaKnown RBP22.27■■□□□ 1.16
HOXC8-201ENST00000040584 PPP1R2P1Q96PQ5 205 aa22.27■■□□□ 1.16
HOXC8-201ENST00000040584 PSKH2Q96QS6 385 aa22.27■■□□□ 1.16
HOXC8-201ENST00000040584 SLC2A11Q9BYW1 496 aa22.27■■□□□ 1.16
HOXC8-201ENST00000040584 POLR1EQ9GZS1 481 aaKnown RBP22.27■■□□□ 1.16
HOXC8-201ENST00000040584 AAR2Q9Y312 384 aaKnown RBP22.27■■□□□ 1.16
HOXC8-201ENST00000040584 ANXA9O76027 345 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 ALDH3A1P30838 453 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 CD86P42081 329 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 CTSOP43234 321 aaPredicted RBP22.26■■□□□ 1.15
HOXC8-201ENST00000040584 IHHQ14623 411 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 RETSATQ6NUM9 610 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 ADGRD1Q6QNK2 874 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 TTC8Q8TAM2 541 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 ARRDC2Q8TBH0 407 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 EXOC2Q96KP1 924 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 SEMA3CQ99985 751 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 APOL2Q9BQE5 337 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 MLXIPLQ9NP71 852 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 EPS15L1Q9UBC2 864 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 RABGEF1Q9UJ41 708 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 FBXO10Q9UK96 956 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 FCF1Q9Y324 198 aaKnown RBP22.26■■□□□ 1.15
HOXC8-201ENST00000040584 TEX264Q9Y6I9 313 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 PMPCBO75439 489 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 ECI2O75521 394 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 SPAG6O75602 509 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 MMP2P08253 660 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 RGRP47804 291 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 SETDB1Q15047 1291 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 GAB4Q2WGN9 574 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 INO80DQ53TQ3 878 aaPredicted RBP22.26■■□□□ 1.15
HOXC8-201ENST00000040584 LRRC8BQ6P9F7 803 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 RNF135Q8IUD6 432 aa22.26■■□□□ 1.15
HOXC8-201ENST00000040584 ANKMY2Q8IV38 441 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms