RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Ccser1Q8C0C4 895 aa13.38□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Itfg1Q99KW9 610 aa13.38□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Scd3Q99PL7 359 aa13.38□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Snrpb2Q9CQI7 225 aaKnown RBP13.38□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gemin2Q9CQQ4 269 aa13.38□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Slc25a19Q9DAM5 318 aa13.38□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Smpd3Q9JJY3 655 aa13.38□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Trpc4apQ9JLV2 797 aa13.38□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Sh2d3cQ9QZS8 854 aa13.38□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Fut8Q9WTS2 575 aa13.38□□□□□ -0.27
Rnf40-202ENSMUST00000205694 TfgQ9Z1A1 397 aa13.38□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Smok3cA0A087WSF2 504 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 MttpO08601 894 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Hmox2O70252 315 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Hoxa11P31311 313 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Traf3Q60803 567 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Phlda1Q62392 405 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Olfr297Q7TS07 310 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ankrd52Q8BTI7 1076 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Tmem161bQ8C2L6 487 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ddx52Q8K301 598 aaKnown RBP13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 GcshQ91WK5 170 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Tmem39aQ9CYC3 486 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Mfsd10Q9D2V8 456 aaKnown RBP13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Snrnp48Q9D361 337 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Efhd2Q9D8Y0 240 aaKnown RBP13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Actrt1Q9D9J3 376 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Nusap1Q9ERH4 427 aaKnown RBP13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Tbc1d16A2ABG4 766 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Olfr1305A2AVW3 312 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Grip2G3XA20 1042 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Il1rnP25085 178 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Kcnd1Q03719 651 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Spink5Q148R4 1017 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ampd1Q3V1D3 745 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Clec12aQ504P2 267 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Q6PAC4 1279 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Klhl17Q6TDP3 640 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Nemp1Q6ZQE4 437 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Luzp2Q8BGY3 345 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Bhlhe22Q8C6A8 355 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Pnpla8Q8K1N1 776 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Mtg1Q8R2R6 326 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Olfr541Q8VGM0 312 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Pcdhb16Q91Y03 802 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 SncaipQ99ME3 962 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Cby3Q9CVN6 235 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Wdr55Q9CX97 388 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Efcab9Q9DAM2 216 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Hey2Q9QUS4 339 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 XkQ9QXY7 446 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Shmt1P50431 478 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Serpinb5P70124 375 aaKnown RBP13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Itga2Q62469 1178 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Olfr293Q7TS10 336 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Tecpr1Q80VP0 1166 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Zbtb44Q8R0A2 453 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Mospd1Q8VEL0 213 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Olfr449Q8VGW8 311 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Setd7Q8VHL1 366 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Marc1Q9CW42 340 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ropn1Q9ESG2 212 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ulk2Q9QY01 1037 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 DgkeQ9R1C6 564 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 AccsA2AIG8 502 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Esp31A8R0W3 114 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gm6811E9Q3Y8 510 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gm5814J3QP80 125 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ercc2O08811 760 aaKnown RBP13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Pole2O54956 527 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Csnk2bP67871 215 aaKnown RBP13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Dnajc11Q5U458 559 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Olfr20Q7TRX9 314 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Snx8Q8CFD4 459 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Mfsd14bQ8CIA9 507 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Vmn1r64Q8R2B8 320 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Stard13Q923Q2 1113 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gtf2ird2Q99NI3 936 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Bap1Q99PU7 728 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gemin6Q9CX53 166 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Dkk3Q9QUN9 349 aa13.37□□□□□ -0.27
Rnf40-202ENSMUST00000205694 PpigA2AR02 752 aaKnown RBP13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Xlr5aA2BI45 236 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Acvr2bP27040 536 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 DsppP97399 934 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Mtf2Q02395 593 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Bcl2a1Q07440 172 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Pcnx4Q3UVY5 1174 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Defa17Q64016 82 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Phf8Q80TJ7 1023 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ldhal6bQ8BVP2 382 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Exo5Q9CXP9 373 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Syvn1Q9DBY1 612 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Tmem176aQ9DCS1 244 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Dpy19l4A2AJQ3 722 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 S100zB9EJL3 99 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Olfr564E9PWA8 316 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Cyp2f2P33267 491 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Hnf4aP49698 474 aa13.36□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Rap1gap2Q5SVL6 712 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms