RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Mcoln1Q99J21 580 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Fam133bQ9CVI2 245 aaKnown RBP7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Nek3Q9R0A5 511 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tle6Q9WVB3 581 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Mbd3Q9Z2D8 285 aaKnown RBP7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Mroh6V9GX81 722 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Prr14lE9Q7C4 1971 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Nlrc5C3VPR6 1915 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Myh2G3UW82 1942 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Znf568E9PYI1 671 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Hoxb9P20615 250 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Pald1P70261 859 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Pkn1P70268 946 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Zbtb2Q3V3W4 514 aaKnown RBP7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gcnt3Q5JCT0 437 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tbc1d9bQ5SVR0 1263 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Pick1Q62083 416 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Grm4Q68EF4 912 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Pptc7Q6NVE9 310 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tm7sf2Q71KT5 418 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Olfr1357Q7TQU7 313 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tmtc4Q8BG19 741 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Cfap69Q8BH53 942 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Snx22Q8C084 192 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 LnpepQ8C129 1025 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Ikzf4Q8C208 586 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Asb2Q8K0L0 634 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gpr18Q8K1Z6 331 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tm2d2Q8R0I4 213 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Defb10Q8R2I8 73 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Dtx2Q8R3P2 619 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 CutalQ9D1U5 156 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tex44Q9DA60 530 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 FliiQ9JJ28 1271 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 SufuQ9Z0P7 484 aa7.37□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gm29666A0A087WQ99 126 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Atg4a-psA0A0G2JFS9 396 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Pramef6A2A8M8 474 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gm13102A2ASJ3 519 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Nova2D3YVV7 556 aaKnown RBP7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Cyp3a57D3YYZ0 503 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Vmn2r110E9PWD5 858 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Vmn2r17E9PYF5 849 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Slc25a17O70579 307 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 CnpP16330 420 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 PrkchP23298 683 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Atxn1P54254 791 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gtf2f1Q3THK3 508 aaKnown RBP7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Vps54Q5SPW0 977 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Klra5Q60652 266 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Cd53Q61451 219 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tspan7Q62283 249 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Muc19Q6JHY2 733 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Zdhhc25Q810M4 279 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 C8bQ8BH35 589 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tmem108Q8BHE4 574 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Atg4aQ8C9S8 396 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 H6pdQ8CFX1 789 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Lrrc25Q8K1T1 297 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Agpat2Q8K3K7 278 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Vmn1r69Q8VIC1 319 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Eif2s2Q99L45 331 aaKnown RBP7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Sgo1Q9CXH7 517 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Sapcd1Q9CY86 146 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 GhrlQ9EQX0 117 aa7.36□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Rexo5D3YW29 759 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Mex3aG3UYU0 520 aaKnown RBP7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 SlkO54988 1233 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 HunkO88866 714 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Zfp36l2P23949 484 aaKnown RBP7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gjb3P28231 270 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Exosc10P56960 887 aaKnown RBP7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Ypel5P62700 121 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Six5P70178 719 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 InhbaQ04998 424 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Fam228bQ497Q6 232 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Zbtb45Q52KG4 520 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Dhrs13Q5SS80 376 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Icam5Q60625 917 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Cdc37Q61081 379 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Ccdc148Q6P5U8 527 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gemin4Q6P6L6 1058 aaKnown RBP7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Dtx4Q6PDK8 616 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Dact2Q7TN08 757 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Arl15Q8BGR6 204 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Sh3rf2Q8BZT2 735 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Cog5Q8C0L8 829 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Rec8Q8C5S7 591 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Ssx2ipQ8VC66 615 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Pcdh18Q8VHR0 1134 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Rdm1Q9CQK3 281 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 8030423J24RikQ9CX45 142 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tbc1d15Q9CXF4 671 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 PigkQ9CXY9 395 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 MthfsQ9D110 203 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Fezf2Q9ESP5 455 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Prg3Q9JL95 222 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Cry2Q9R194 592 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Brca1P48754 1812 aa7.35□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Rgs12Q8CGE9 1381 aa7.34□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms