RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 HalP35492 657 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 LmnaP48678 665 aaKnown RBP18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ybx1P62960 322 aaKnown RBP18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ctps2P70303 586 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Polr1bP70700 1135 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Slc16a10Q3U9N9 512 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ip6k1Q6PD10 433 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Scd4Q6T707 353 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Cspg5Q71M36 566 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ccdc116Q80X53 541 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 DrgxQ8BYH0 263 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Traf3ip2Q8N7N6 555 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ggt7Q99JP7 662 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Dhrs1Q99L04 313 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Tnfaip8l2Q9D8Y7 184 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Rnft1Q9DCN7 395 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 MecrQ9DCS3 373 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Cyhr1Q9QXA1 311 aa18.56■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm28168A0A087WNP1 180 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm14401A2ARV7 303 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm3259D3YUK0 475 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Zscan4bE9Q3G0 505 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 AladP10518 330 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Tlx1P43345 332 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Fam171bQ14CH0 825 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Q32M26 199 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Dyrk2Q5U4C9 599 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Smarcd1Q61466 515 aaKnown RBP18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gba2Q69ZF3 918 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Olfr1062Q7TR71 315 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 StgQ8BM15 349 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gbp9Q8BTS3 619 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Nudt13Q8JZU0 352 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Pcdhb11Q91UZ8 797 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Sh3d19Q91X43 789 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 PclafQ9CQX4 110 aaKnown RBP18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ddit4Q9D3F7 229 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Echdc3Q9D7J9 300 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Prg3Q9JL95 222 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Znf106O88466 1888 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Vmn1r2A2AMT6 306 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm12800B1AUV4 484 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Vmn2r27D3YUK6 857 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Olfr596F8VQ26 312 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm12794L7MTS5 483 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Fpr-rs3O88537 343 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 P01673 111 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Mcpt1P11034 246 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 YwhaqP68254 245 aaKnown RBP18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ssxb3Q6XAS4 170 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Cept1Q8BGS7 416 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Peli3Q8BXR6 445 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 BsndQ8VIM4 307 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 CenpsQ9D084 142 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Klhdc8bQ9D2D9 354 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Lrrc46Q9DAP0 323 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Slamf1Q9QUM4 343 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 H2afyQ9QZQ8 372 aaKnown RBP18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Nrf1Q9WU00 503 aa18.55■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ighv11-2A0A075B5R8 117 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 OgdhlE9Q7L0 1029 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Cd163Q2VLH6 1121 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Rbm22Q8BHS3 420 aaKnown RBP18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Dyrk4Q8BI55 632 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Csnk1g1Q8BTH8 459 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Zbtb6Q8K088 423 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Zfp65Q91W94 390 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Zfp655Q9CZP3 541 aaKnown RBP18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Eef1akmt2Q9D853 244 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Cngb3Q9JJZ9 694 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Znhit2Q9QY66 399 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Syt5Q9R0N5 386 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm6133B2RY53 190 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Mtx3D3YTP3 312 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 FgaE9PV24 789 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Serpine3E9Q6A2 401 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Vmn2r65G3X931 845 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 OmdO35103 423 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Sult1e1P49891 295 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Lsmem1Q3UQS2 128 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Mthfd1lQ3V3R1 977 aaKnown RBP18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Tecpr1Q80VP0 1166 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ttc34Q8C0Q3 554 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Tmem154Q8C4Q9 181 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Slfn5Q8CBA2 884 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Fam83aQ8K2P2 436 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ppp4r1Q8K2V1 951 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ppp6cQ9CQR6 305 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Mrpl17Q9D8P4 176 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Rps6ka2Q9WUT3 733 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Trpc7Q9WVC5 862 aa18.54■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm6509A0A0J9YUV1 481 aa18.53■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm12248A0A1W2P8B8 313 aa18.53■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm5751A2AHC8 147 aa18.53■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ssxb8B1AY40 170 aa18.53■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Gm6351K9J7D1 481 aa18.53■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Pcbp1P60335 356 aaKnown RBP18.53■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Ptchd3Q0EEE2 906 aa18.53■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Crtc1Q68ED7 630 aa18.53■□□□□ 0.56
Ccdc3-201ENSMUST00000027988 Pnma8aQ80VM8 430 aa18.53■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms