RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 LINGO4Q6UY18 593 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 ZNF783Q6ZMS7 281 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 PRPF39Q86UA1 669 aaKnown RBP8.97□□□□□ -0.97
PHGDH-219ENST00000641513 RASSF3Q86WH2 238 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 CCNJLQ8IV13 435 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 SRRM1Q8IYB3 904 aaKnown RBP8.97□□□□□ -0.97
PHGDH-219ENST00000641513 CYP4X1Q8N118 509 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 PGBD5Q8N414 524 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 CPXM2Q8N436 756 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 TEX26Q8N6G2 289 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 PPHLN1Q8NEY8 458 aaKnown RBP8.97□□□□□ -0.97
PHGDH-219ENST00000641513 PPP2R3CQ969Q6 453 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 IFT43Q96FT9 208 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 IMP4Q96G21 291 aaKnown RBP8.97□□□□□ -0.97
PHGDH-219ENST00000641513 ZNF599Q96NL3 588 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 SEMA3CQ99985 751 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 ELAC2Q9BQ52 826 aaKnown RBP8.97□□□□□ -0.97
PHGDH-219ENST00000641513 POLR1EQ9GZS1 481 aaKnown RBP8.97□□□□□ -0.97
PHGDH-219ENST00000641513 TRABDQ9H4I3 376 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 TDP1Q9NUW8 608 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 FGFR1OP2Q9NVK5 253 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 MKS1Q9NXB0 559 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 KLHL14Q9P2G3 628 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 SEPT3Q9UH03 358 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 RPL26L1Q9UNX3 145 aaKnown RBP8.97□□□□□ -0.97
PHGDH-219ENST00000641513 CCL26Q9Y258 94 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 TBC1D30Q9Y2I9 924 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 ACTL7AQ9Y615 435 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 RPS6KL1Q9Y6S9 549 aa8.97□□□□□ -0.97
PHGDH-219ENST00000641513 IQANK1A0A1B0GTG1 560 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 CACNG3O60359 315 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 GREM1O60565 184 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 SNAP91O60641 907 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 DCTN3O75935 186 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 WFS1O76024 890 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 HOXD9P28356 352 aaPredicted RBP8.96□□□□□ -0.98
PHGDH-219ENST00000641513 MPP2Q14168 576 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 CBX2Q14781 532 aaPredicted RBP8.96□□□□□ -0.98
PHGDH-219ENST00000641513 POU6F1Q14863 301 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 CRYMQ14894 314 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 SNCBQ16143 134 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 DBN1Q16643 649 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 FSCBQ5H9T9 825 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 PRSS36Q5K4E3 855 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 FBXW10Q5XX13 1052 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 STEAP4Q687X5 459 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 CYS1Q717R9 158 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 RNF135Q8IUD6 432 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 PARP9Q8IXQ6 854 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 FAM217AQ8IXS0 508 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 ITFG1Q8TB96 612 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 WFDC5Q8TCV5 224 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 CDKL2Q92772 493 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 USP13Q92995 863 aaPredicted RBP8.96□□□□□ -0.98
PHGDH-219ENST00000641513 ZNF707Q96C28 371 aaPredicted RBP8.96□□□□□ -0.98
PHGDH-219ENST00000641513 ZNF419Q96HQ0 510 aaPredicted RBP8.96□□□□□ -0.98
PHGDH-219ENST00000641513 EXOC2Q96KP1 924 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 MRGPRX2Q96LB1 330 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 ZSWIM3Q96MP5 696 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 ACE2Q9BYF1 805 aaPredicted RBP8.96□□□□□ -0.98
PHGDH-219ENST00000641513 IL22Q9GZX6 179 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 VPS11Q9H270 941 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 SFXN1Q9H9B4 322 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 KIF9Q9HAQ2 790 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 PDFQ9HBH1 243 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 SCUBE2Q9NQ36 999 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 TXLNGQ9NUQ3 528 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 ZNF180Q9UJW8 692 aa8.96□□□□□ -0.98
PHGDH-219ENST00000641513 MAGEB16A2A368 324 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 EPOPA6NHQ4 379 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 CXorf49A8MYA2 514 aaPredicted RBP8.95□□□□□ -0.98
PHGDH-219ENST00000641513 NEDD8-MDP1E9PL57 170 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 EDF1O60869 148 aaKnown RBP8.95□□□□□ -0.98
PHGDH-219ENST00000641513 SPAG7O75391 227 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 GJB3O75712 270 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 PRAMEF12O95522 483 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 MT-ND3P03897 115 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 ATP5BP06576 529 aaKnown RBP8.95□□□□□ -0.98
PHGDH-219ENST00000641513 MMP2P08253 660 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 SERPINF2P08697 491 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 FSHRP23945 695 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 ALDH3A1P30838 453 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 CHRNA4P43681 627 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 SCNN1BP51168 640 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 WDR4P57081 412 aaKnown RBP8.95□□□□□ -0.98
PHGDH-219ENST00000641513 NCALDP61601 193 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 CDK18Q07002 472 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 RFTN1Q14699 578 aaPredicted RBP8.95□□□□□ -0.98
PHGDH-219ENST00000641513 CYTH1Q15438 398 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 LGSNQ5TDP6 509 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 TRMT10BQ6PF06 316 aaKnown RBP8.95□□□□□ -0.98
PHGDH-219ENST00000641513 KDELC1Q6UW63 502 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 SLC26A11Q86WA9 606 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 LRRC6Q86X45 466 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 ARID3BQ8IVW6 561 aaPredicted RBP8.95□□□□□ -0.98
PHGDH-219ENST00000641513 UNC5BQ8IZJ1 945 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 PAF1Q8N7H5 531 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 ANKRD42Q8N9B4 389 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 CCDC63Q8NA47 563 aa8.95□□□□□ -0.98
PHGDH-219ENST00000641513 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms