RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ANAPC2Q9UJX6 822 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 WASF2Q9Y6W5 498 aa9.9□□□□□ -0.82
PHGDH-212ENST00000641247 V9GYY5 206 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-212ENST00000641247 TDRD6O60522 2096 aaKnown RBP9.9□□□□□ -0.82
PHGDH-212ENST00000641247 ANKRD17O75179 2603 aaKnown RBP9.9□□□□□ -0.82
PHGDH-212ENST00000641247 TRIM49BA6NDI0 452 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 KCNU1A8MYU2 1149 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 MAPK13O15264 365 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 LEFTY1O75610 366 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 ENDOD1O94919 500 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 IGLV3-25P01717 112 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 ANXA6P08133 673 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 TPM1P09493 284 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 SETSIPP0DME0 302 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 VDRP11473 427 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 CCL4P13236 92 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 ATP1A3P13637 1013 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 GGCXP38435 758 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 RPIAP49247 311 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 ZNF75DP51815 510 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 PMS1P54277 932 aaKnown RBP9.89□□□□□ -0.83
PHGDH-212ENST00000641247 LRRC63Q05C16 580 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 C16orf72Q14CZ0 275 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 CDKAL1Q5VV42 579 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 KCTD16Q68DU8 428 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 KRT39Q6A163 491 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 ANKRD40Q6AI12 368 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 ZNF787Q6DD87 383 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 LCLAT1Q6UWP7 414 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 ZSCAN1Q8NBB4 408 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 CCDC112Q8NEF3 446 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 ZNF397Q8NF99 534 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-212ENST00000641247 FAM174AQ8TBP5 190 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 GRIN3AQ8TCU5 1115 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 FUBP1Q96AE4 644 aaKnown RBP9.89□□□□□ -0.83
PHGDH-212ENST00000641247 CENPTQ96BT3 561 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 ABHD17AQ96GS6 310 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 SERPINB11Q96P15 392 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 LENG8Q96PV6 779 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-212ENST00000641247 TSG101Q99816 390 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 C1QTNF2Q9BXJ5 285 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 HDAC8Q9BY41 377 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 TNKS2Q9H2K2 1166 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 MBNL1Q9NR56 388 aaKnown RBP9.89□□□□□ -0.83
PHGDH-212ENST00000641247 SAMSN1Q9NSI8 373 aaKnown RBP9.89□□□□□ -0.83
PHGDH-212ENST00000641247 HESX1Q9UBX0 185 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 TRAF3IP3Q9Y228 551 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 FRMD4BQ9Y2L6 1034 aa9.89□□□□□ -0.83
PHGDH-212ENST00000641247 RP1P56715 2156 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 A0A1W2PQC6 194 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 F5H5T6 163 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 NKX2-8O15522 239 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 ATP8B1O43520 1251 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 NRDCO43847 1150 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 ADRB3P13945 408 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 LIFP15018 202 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 NR1D1P20393 614 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 NR2F2P24468 414 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 NOS2P35228 1153 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 ABL2P42684 1182 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 RPS21P63220 83 aaKnown RBP9.88□□□□□ -0.83
PHGDH-212ENST00000641247 FANCCQ00597 558 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 NNTQ13423 1086 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 CUL2Q13617 745 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 TAF5Q15542 800 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 TERF2Q15554 542 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 CBWD6Q4V339 395 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 CBWD3Q5JTY5 395 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 CBWD5Q5RIA9 395 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 ESRP1Q6NXG1 681 aaKnown RBP9.88□□□□□ -0.83
PHGDH-212ENST00000641247 LINGO4Q6UY18 593 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 DPY19L3Q6ZPD9 716 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 INTS8Q75QN2 995 aaKnown RBP9.88□□□□□ -0.83
PHGDH-212ENST00000641247 FAM186BQ8IYM0 893 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 Q8N9G6 341 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-212ENST00000641247 FBXL13Q8NEE6 735 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 PCDH19Q8TAB3 1148 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 KIAA1524Q8TCG1 905 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 MRFAP1L1Q96HT8 127 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 FAXDC2Q96IV6 333 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 FEM1CQ96JP0 617 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 SRRTQ9BXP5 876 aaKnown RBP9.88□□□□□ -0.83
PHGDH-212ENST00000641247 STRADBQ9C0K7 418 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 SEMA6CQ9H3T2 930 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 THAP9Q9H5L6 903 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 SLC25A13Q9UJS0 675 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 TUBD1Q9UJT1 453 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 HS3ST2Q9Y278 367 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 ITM2BQ9Y287 266 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 PCDHB11Q9Y5F2 797 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 ACTL7AQ9Y615 435 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 RNF215Q9Y6U7 377 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 NBASA2RRP1 2371 aa9.88□□□□□ -0.83
PHGDH-212ENST00000641247 CREBBPQ92793 2442 aa9.87□□□□□ -0.83
PHGDH-212ENST00000641247 A0A0D9SEW6 157 aa9.87□□□□□ -0.83
PHGDH-212ENST00000641247 A1L4Q6 167 aa9.87□□□□□ -0.83
PHGDH-212ENST00000641247 TCAF2A6NFQ2 919 aa9.87□□□□□ -0.83
PHGDH-212ENST00000641247 LRRC10BA6NIK2 292 aa9.87□□□□□ -0.83
PHGDH-212ENST00000641247 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-212ENST00000641247 RIOK3O14730 519 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms