RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 ARHGAP42A6NI28 874 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 A6NNZ2 444 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 ENC1O14682 589 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 LRCH4O75427 683 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 ABL2P42684 1182 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 SGCGQ13326 291 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 ACAP1Q15027 740 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 CCNI2Q6ZMN8 369 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-232ENST00000640653 GCNT7Q6ZNI0 430 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 OR13H1Q8NG92 308 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 CPLX3Q8WVH0 158 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 CELF6Q96J87 481 aaKnown RBP25.56■■□□□ 1.68
VEGFA-232ENST00000640653 KLHL11Q9NVR0 708 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 IFNKQ9P0W0 207 aa25.56■■□□□ 1.68
VEGFA-232ENST00000640653 LUC7L2Q9Y383 392 aaKnown RBP25.56■■□□□ 1.68
VEGFA-232ENST00000640653 COL5A1P20908 1838 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-232ENST00000640653 KNL1Q8NG31 2342 aa25.55■■□□□ 1.68
VEGFA-232ENST00000640653 PAK4O96013 591 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-232ENST00000640653 PCK1P35558 622 aa25.55■■□□□ 1.68
VEGFA-232ENST00000640653 CLDN2P57739 230 aa25.55■■□□□ 1.68
VEGFA-232ENST00000640653 SKOR2Q2VWA4 1001 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-232ENST00000640653 CCDC157Q569K6 752 aa25.55■■□□□ 1.68
VEGFA-232ENST00000640653 PPP6R3Q5H9R7 873 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-232ENST00000640653 TMPRSS7Q7RTY8 843 aa25.55■■□□□ 1.68
VEGFA-232ENST00000640653 PTAR1Q7Z6K3 402 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-232ENST00000640653 TTC7BQ86TV6 843 aa25.55■■□□□ 1.68
VEGFA-232ENST00000640653 DCP2Q8IU60 420 aaKnown RBP25.55■■□□□ 1.68
VEGFA-232ENST00000640653 GALNT15Q8N3T1 639 aa25.55■■□□□ 1.68
VEGFA-232ENST00000640653 ZCCHC14Q8WYQ9 949 aaKnown RBP25.55■■□□□ 1.68
VEGFA-232ENST00000640653 LHX3Q9UBR4 397 aa25.55■■□□□ 1.68
VEGFA-232ENST00000640653 ZMIZ1Q9ULJ6 1067 aa25.55■■□□□ 1.68
VEGFA-232ENST00000640653 CABIN1Q9Y6J0 2220 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 PRAMEF11O60813 436 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 KRT37O76014 449 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 TPM3P06753 285 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 ERCC2P18074 760 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 FGL2Q14314 439 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 GRM3Q14832 879 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 CYTH1Q15438 398 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 KYAT3Q6YP21 454 aaKnown RBP25.54■■□□□ 1.68
VEGFA-232ENST00000640653 CYP4V2Q6ZWL3 525 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-232ENST00000640653 KANSL1Q7Z3B3 1105 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 NETO2Q8NC67 525 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 VOPP1Q96AW1 172 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 LENG8Q96PV6 779 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-232ENST00000640653 CPEB1Q9BZB8 566 aaKnown RBP25.54■■□□□ 1.68
VEGFA-232ENST00000640653 SLC39A8Q9C0K1 460 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 ZWILCHQ9H900 591 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 PDFQ9HBH1 243 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 DKK3Q9UBP4 350 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 PCDHGA1Q9Y5H4 931 aa25.54■■□□□ 1.68
VEGFA-232ENST00000640653 MAP1BP46821 2468 aaKnown RBP25.53■■□□□ 1.68
VEGFA-232ENST00000640653 IGLON5A6NGN9 336 aa25.53■■□□□ 1.68
VEGFA-232ENST00000640653 SDC3O75056 442 aa25.53■■□□□ 1.68
VEGFA-232ENST00000640653 HCAR3P49019 387 aa25.53■■□□□ 1.68
VEGFA-232ENST00000640653 PAPOLAP51003 745 aaKnown RBP25.53■■□□□ 1.68
VEGFA-232ENST00000640653 Q6ZSR6 202 aa25.53■■□□□ 1.68
VEGFA-232ENST00000640653 ASB12Q8WXK4 309 aa25.53■■□□□ 1.68
VEGFA-232ENST00000640653 IFT43Q96FT9 208 aa25.53■■□□□ 1.68
VEGFA-232ENST00000640653 EXOC2Q96KP1 924 aa25.53■■□□□ 1.68
VEGFA-232ENST00000640653 C1QTNF2Q9BXJ5 285 aa25.53■■□□□ 1.68
VEGFA-232ENST00000640653 ITM2BQ9Y287 266 aa25.53■■□□□ 1.68
VEGFA-232ENST00000640653 J3KR12 359 aa25.52■■□□□ 1.68
VEGFA-232ENST00000640653 FPGTO14772 594 aa25.52■■□□□ 1.68
VEGFA-232ENST00000640653 AREL1O15033 823 aa25.52■■□□□ 1.68
VEGFA-232ENST00000640653 C1SP09871 688 aa25.52■■□□□ 1.68
VEGFA-232ENST00000640653 CDK4P11802 303 aa25.52■■□□□ 1.68
VEGFA-232ENST00000640653 RABIFP47224 123 aa25.52■■□□□ 1.68
VEGFA-232ENST00000640653 PIGHQ14442 188 aaPredicted RBP25.52■■□□□ 1.68
VEGFA-232ENST00000640653 BOLA3Q53S33 107 aa25.52■■□□□ 1.68
VEGFA-232ENST00000640653 DENND6BQ8NEG7 585 aa25.52■■□□□ 1.68
VEGFA-232ENST00000640653 BMFQ96LC9 184 aa25.52■■□□□ 1.68
VEGFA-232ENST00000640653 THAP2Q9H0W7 228 aa25.52■■□□□ 1.68
VEGFA-232ENST00000640653 GGT7Q9UJ14 662 aa25.52■■□□□ 1.68
VEGFA-232ENST00000640653 FRYQ5TBA9 3013 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 DOCK9Q9BZ29 2069 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 ASPMQ8IZT6 3477 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 H3BRJ5 948 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 RAD51BO15315 384 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 GYPCP04921 128 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 XPAP23025 273 aaPredicted RBP25.51■■□□□ 1.67
VEGFA-232ENST00000640653 SUOXP51687 545 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 NFKBIBQ15653 356 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 HS1BP3Q53T59 392 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 AFMIDQ63HM1 303 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 SLC22A18ASQ8N1D0 253 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 LZTR1Q8N653 840 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 HCAR2Q8TDS4 363 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 CXorf40AQ8TE69 158 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 SP110Q9HB58 689 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 CWC15Q9P013 229 aaKnown RBP25.51■■□□□ 1.67
VEGFA-232ENST00000640653 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.51■■□□□ 1.675e-11■■■□□ 15.1
VEGFA-232ENST00000640653 EPG5Q9HCE0 2579 aa25.51■■□□□ 1.67
VEGFA-232ENST00000640653 CEP295Q9C0D2 2601 aa25.5■■□□□ 1.67
VEGFA-232ENST00000640653 POM121BA6NF01 834 aa25.5■■□□□ 1.67
VEGFA-232ENST00000640653 DFFAO00273 331 aa25.5■■□□□ 1.67
VEGFA-232ENST00000640653 INSIG1O15503 277 aa25.5■■□□□ 1.67
VEGFA-232ENST00000640653 SPINT1O43278 529 aa25.5■■□□□ 1.67
VEGFA-232ENST00000640653 RFPL3O75679 317 aa25.5■■□□□ 1.67
VEGFA-232ENST00000640653 PALMO75781 387 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms