RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	TBC1D3D	A0A087WVF3	549 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	TBC1D3I	A0A087WXS9	549 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	TBC1D3E	A0A087X179	549 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	TBC1D3K	A0A087X1G2	549 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	MACROD2	A1Z1Q3	448 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	TBC1D3F	A6NER0	549 aa	Predicted RBP	27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	TBC1D3L	B9A6J9	549 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	WNT9A	O14904	365 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	KHNYN	O15037	678 aa	Known RBP	27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	ARHGAP6	O43182	974 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	LAT	O43561	262 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	TBC1D3H	P0C7X1	549 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	KRT10	P13645	584 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	ADRB3	P13945	408 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	CR2	P20023	1033 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	CD27	P26842	260 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	DPP6	P42658	865 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	PEX5	P50542	639 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	NAP1L1	P55209	391 aa	Known RBP	27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	KIF5A	Q12840	1032 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	TBC1D3G	Q6DHY5	549 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	TBC1D3C	Q6IPX1	549 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	NPNT	Q6UXI9	565 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	NT5DC3	Q86UY8	548 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	LRRC49	Q8IUZ0	686 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	TBC1D3	Q8IZP1	549 aa	Predicted RBP	27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	ZCCHC9	Q8N567	271 aa	Known RBP	27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	KIAA1524	Q8TCG1	905 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	SNX19	Q92543	992 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	MAML1	Q92585	1016 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	CEP250	Q9BV73	2442 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	CINP	Q9BW66	212 aa	Predicted RBP	27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	OSBPL1A	Q9BXW6	950 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	SEPT3	Q9UH03	358 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	PCDHA3	Q9Y5H8	950 aa		27.03	■■□□□ 1.92
VEGFA-231	ENST00000640499	SERPINF2	P08697	491 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	ITIH2	P19823	946 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	CTNNA1	P35221	906 aa	Known RBP	27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	NEK3	P51956	506 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	BNC1	Q01954	994 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	FAM182A	Q5T1J6	154 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	ZSWIM9	Q86XI8	627 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	RFX6	Q8HWS3	928 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	CCDC112	Q8NEF3	446 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	PPP1R16A	Q96I34	528 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	DYRK4	Q9NR20	520 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	SLC6A14	Q9UN76	642 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	ZFR2	Q9UPR6	939 aa	Known RBP	27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499	FADS3	Q9Y5Q0	445 aa		27.02	■■□□□ 1.92
VEGFA-231	ENST00000640499		A0A1W2PPC4	97 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	APOL1	O14791	398 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	BCAT2	O15382	392 aa	Predicted RBP	27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	TIMP2	P16035	220 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	LMNB2	Q03252	620 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	IHH	Q14623	411 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	TRIM69	Q86WT6	500 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	CAMK1D	Q8IU85	385 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	RCOR2	Q8IZ40	523 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	CEP76	Q8TAP6	659 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	ALG3	Q92685	438 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	FATE1	Q969F0	183 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	MGME1	Q9BQP7	344 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	HERPUD2	Q9BSE4	406 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	PREB	Q9HCU5	417 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	DKK3	Q9UBP4	350 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	GGT7	Q9UJ14	662 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	CAPN6	Q9Y6Q1	641 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	CACNA1E	Q15878	2313 aa		27.01	■■□□□ 1.91
VEGFA-231	ENST00000640499	ANKRD36	A6QL64	1941 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499		A0A1B0GTW7	788 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	CDX4	O14627	284 aa	Predicted RBP	27	■■□□□ 1.91
VEGFA-231	ENST00000640499	MATN3	O15232	486 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	RNGTT	O60942	597 aa	Known RBP	27	■■□□□ 1.91
VEGFA-231	ENST00000640499	ZRANB2	O95218	330 aa	Known RBP eCLIP	27	■■□□□ 1.91	4e-17	■■□□□ 11.4
VEGFA-231	ENST00000640499	CFI	P05156	583 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	CCNC	P24863	283 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	CTNNA2	P26232	953 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	MAX	P61244	160 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	DYNLT1	P63172	113 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	RAD51	Q06609	339 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	IFI16	Q16666	785 aa	Known RBP	27	■■□□□ 1.91
VEGFA-231	ENST00000640499	FBXL19	Q6PCT2	694 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	C12orf50	Q8NA57	414 aa	Predicted RBP	27	■■□□□ 1.91
VEGFA-231	ENST00000640499	EXD1	Q8NHP7	514 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	HDAC11	Q96DB2	347 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	OLFM3	Q96PB7	478 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	LGMN	Q99538	433 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	MAK16	Q9BXY0	300 aa	Known RBP	27	■■□□□ 1.91
VEGFA-231	ENST00000640499	SUV39H2	Q9H5I1	410 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	TM9SF3	Q9HD45	589 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	SAE1	Q9UBE0	346 aa	Predicted RBP	27	■■□□□ 1.91
VEGFA-231	ENST00000640499	HEY1	Q9Y5J3	304 aa		27	■■□□□ 1.91
VEGFA-231	ENST00000640499	hCG_1818297	A0A087WSY0	165 aa		26.99	■■□□□ 1.91
VEGFA-231	ENST00000640499	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	26.99	■■□□□ 1.91
VEGFA-231	ENST00000640499		A0A1W2PQU0	124 aa		26.99	■■□□□ 1.91
VEGFA-231	ENST00000640499	TSPAN11	A1L157	253 aa		26.99	■■□□□ 1.91
VEGFA-231	ENST00000640499	AREL1	O15033	823 aa		26.99	■■□□□ 1.91
VEGFA-231	ENST00000640499	MAT2A	P31153	395 aa	Known RBP	26.99	■■□□□ 1.91
VEGFA-231	ENST00000640499	SCNN1B	P51168	640 aa		26.99	■■□□□ 1.91
VEGFA-231	ENST00000640499	HNRNPD	Q14103	355 aa	Known RBP	26.99	■■□□□ 1.91

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