RNA–Protein interactions for RNA: ENST00000640187.1

SPIN3-237, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-237ENST00000640187 POLE2P56282 527 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 RPS24P62847 133 aaKnown RBP13.18□□□□□ -0.3
SPIN3-237ENST00000640187 RING1Q06587 406 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 CNGA3Q16281 694 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 LRRC26Q2I0M4 334 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 ANO4Q32M45 955 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 PCID2Q5JVF3 399 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 PKN3Q6P5Z2 889 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 KDELC1Q6UW63 502 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 DENND6AQ8IWF6 608 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 UCMAQ8WVF2 138 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 PAWRQ96IZ0 340 aaKnown RBP13.18□□□□□ -0.3
SPIN3-237ENST00000640187 KCNK13Q9HB14 408 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 SNX15Q9NRS6 342 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.18□□□□□ -0.3
SPIN3-237ENST00000640187 MKS1Q9NXB0 559 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 AFF4Q9UHB7 1163 aaKnown RBP13.18□□□□□ -0.3
SPIN3-237ENST00000640187 SCOCQ9UIL1 159 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 TRIM43BA6NCK2 446 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 MUSKO15146 869 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 PARNO95453 639 aaKnown RBP13.18□□□□□ -0.3
SPIN3-237ENST00000640187 CBX6O95503 412 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 BPGMP07738 259 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 IRF1P10914 325 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 SAT1P21673 171 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 KCNA4P22459 653 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 ARNTP27540 789 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 GABRB3P28472 473 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 SESN3P58005 492 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 TMPRSS15P98073 1019 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 IRF9Q00978 393 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 CTBP1Q13363 440 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 MPP3Q13368 585 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 PLD1Q13393 1074 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 SERINC3Q13530 473 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 LRRC49Q8IUZ0 686 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 E2F7Q96AV8 911 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 TRIM43Q96BQ3 446 aaPredicted RBP13.18□□□□□ -0.3
SPIN3-237ENST00000640187 ZNF689Q96CS4 500 aaPredicted RBP13.18□□□□□ -0.3
SPIN3-237ENST00000640187 IMP4Q96G21 291 aaKnown RBP13.18□□□□□ -0.3
SPIN3-237ENST00000640187 TMEM169Q96HH4 297 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 CYP2S1Q96SQ9 504 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 SLC25A51Q9H1U9 297 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 COMMD8Q9NX08 183 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 STOML1Q9UBI4 398 aa13.18□□□□□ -0.3
SPIN3-237ENST00000640187 ZFP37Q9Y6Q3 630 aaPredicted RBP13.18□□□□□ -0.3
SPIN3-237ENST00000640187 ACSL4O60488 711 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 CLTBP09497 229 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 SPRP35270 261 aaPredicted RBP13.17□□□□□ -0.3
SPIN3-237ENST00000640187 LIMK2P53671 638 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 NAB1Q13506 487 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 SEPT6Q14141 434 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 BTG3Q14201 252 aaPredicted RBP13.17□□□□□ -0.3
SPIN3-237ENST00000640187 HECTD3Q5T447 861 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 SLC39A11Q8N1S5 342 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 OR7D4Q8NG98 312 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 IFT43Q96FT9 208 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 OXCT2Q9BYC2 517 aaPredicted RBP13.17□□□□□ -0.3
SPIN3-237ENST00000640187 ENTPD7Q9NQZ7 604 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 SIRPGQ9P1W8 387 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 RPL26L1Q9UNX3 145 aaKnown RBP13.17□□□□□ -0.3
SPIN3-237ENST00000640187 LRCH1Q9Y2L9 728 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 CDH23Q9H251 3354 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 F5H5T6 163 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 TRAFD1O14545 582 aaPredicted RBP13.17□□□□□ -0.3
SPIN3-237ENST00000640187 AHSGP02765 367 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 KITP10721 976 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 GLDCP23378 1020 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 VHLP40337 213 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 GRM3Q14832 879 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 FASTKD1Q53R41 847 aaKnown RBP13.17□□□□□ -0.3
SPIN3-237ENST00000640187 ATG14Q6ZNE5 492 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 TNS4Q8IZW8 715 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 ITFG2Q969R8 447 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 ZNF558Q96NG5 402 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 MCMBPQ9BTE3 642 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 SMPD4Q9NXE4 827 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 YIPF1Q9Y548 306 aa13.17□□□□□ -0.3
SPIN3-237ENST00000640187 TSPAN3O60637 253 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 PLIN3O60664 434 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 ARCN1P48444 511 aaKnown RBP13.16□□□□□ -0.3
SPIN3-237ENST00000640187 MPP1Q00013 466 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 DSG1Q02413 1049 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 CCDC6Q16204 474 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 KHDC1Q4VXA5 237 aaKnown RBP13.16□□□□□ -0.3
SPIN3-237ENST00000640187 FYB2Q5VWT5 728 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 NLRP9Q7RTR0 991 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 PHC3Q8NDX5 983 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 TTC16Q8NEE8 873 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 ARRDC2Q8TBH0 407 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 ACMSDQ8TDX5 336 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 EZH1Q92800 747 aaPredicted RBP13.16□□□□□ -0.3
SPIN3-237ENST00000640187 VPS39Q96JC1 886 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 TRAPPC9Q96Q05 1148 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 FNIP2Q9P278 1114 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 MARCOQ9UEW3 520 aaPredicted RBP13.16□□□□□ -0.3
SPIN3-237ENST00000640187 SLC39A10Q9ULF5 831 aa13.16□□□□□ -0.3
SPIN3-237ENST00000640187 HBS1LQ9Y450 684 aaKnown RBP13.16□□□□□ -0.3
SPIN3-237ENST00000640187 TCAF1Q9Y4C2 921 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms