RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 FGF18O76093 207 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 CSPG5O95196 566 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 RHOQP17081 205 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 GM2AP17900 193 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 ADRA1AP35348 466 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 HARS2P49590 506 aaKnown RBP15.27■□□□□ 0.04
TRIM3-215ENST00000639856 ITGA9Q13797 1035 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 POU6F1Q14863 301 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 TBCCQ15814 346 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 ANO4Q32M45 955 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 POTEHQ6S545 545 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 ZC3HC1Q86WB0 502 aaKnown RBP15.27■□□□□ 0.04
TRIM3-215ENST00000639856 TREML1Q86YW5 311 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 TNS4Q8IZW8 715 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 HMCESQ96FZ2 354 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 MYRFLQ96LU7 910 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 RPRD1AQ96P16 312 aaPredicted RBP15.27■□□□□ 0.04
TRIM3-215ENST00000639856 RHOJQ9H4E5 214 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 DENND2DQ9H6A0 471 aaPredicted RBP15.27■□□□□ 0.04
TRIM3-215ENST00000639856 RNPEPL1Q9HAU8 725 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 MRPL17Q9NRX2 175 aaKnown RBP15.27■□□□□ 0.04
TRIM3-215ENST00000639856 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.27■□□□□ 0.04
TRIM3-215ENST00000639856 TMEM248Q9NWD8 314 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 HSFX1Q9UBD0 423 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 ZNF212Q9UDV6 495 aa15.27■□□□□ 0.04
TRIM3-215ENST00000639856 IPO11Q9UI26 975 aaKnown RBP15.27■□□□□ 0.04
TRIM3-215ENST00000639856 MIA3Q5JRA6 1907 aa15.27■□□□□ 0.03
TRIM3-215ENST00000639856 HSPA1AP0DMV8 641 aaKnown RBP15.26■□□□□ 0.03
TRIM3-215ENST00000639856 HSPA1BP0DMV9 641 aaKnown RBP15.26■□□□□ 0.03
TRIM3-215ENST00000639856 SLC6A4P31645 630 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 CSRP3P50461 194 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 ABCE1P61221 599 aaKnown RBP15.26■□□□□ 0.03
TRIM3-215ENST00000639856 IRF9Q00978 393 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 GRM3Q14832 879 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 TAF12Q16514 161 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 HECTD3Q5T447 861 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 SNX30Q5VWJ9 437 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 RFWD3Q6PCD5 774 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 ATG14Q6ZNE5 492 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 UMODL1-AS1Q8N2C9 162 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 PDZD8Q8NEN9 1154 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 ACVR1CQ8NER5 493 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 PTCD2Q8WV60 388 aaKnown RBP15.26■□□□□ 0.03
TRIM3-215ENST00000639856 OVCA2Q8WZ82 227 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 CCDC106Q9BWC9 280 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 FSD1LQ9BXM9 530 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 RNF38Q9H0F5 515 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 FAM96AQ9H5X1 160 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 SORCS3Q9UPU3 1222 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 INSL5Q9Y5Q6 135 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 G3V2L1 256 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 NEBLO76041 1014 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 ENO1P06733 434 aaKnown RBP15.26■□□□□ 0.03
TRIM3-215ENST00000639856 TACR2P21452 398 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 ARRB2P32121 409 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 PPM1AP35813 382 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 ALDH18A1P54886 795 aaKnown RBP15.26■□□□□ 0.03
TRIM3-215ENST00000639856 TUBB3Q13509 450 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 ACCSLQ4AC99 568 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 RANBP10Q6VN20 620 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 UBE2Q1Q7Z7E8 422 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 CNTN4Q8IWV2 1026 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 CFAP52Q8N1V2 620 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 PPHLN1Q8NEY8 458 aaKnown RBP15.26■□□□□ 0.03
TRIM3-215ENST00000639856 ZBP1Q9H171 429 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 MMADHCQ9H3L0 296 aaPredicted RBP15.26■□□□□ 0.03
TRIM3-215ENST00000639856 NMRAL1Q9HBL8 299 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 MRM3Q9HC36 420 aaKnown RBP15.26■□□□□ 0.03
TRIM3-215ENST00000639856 GKN1Q9NS71 199 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 TRPM5Q9NZQ8 1165 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 SLC39A10Q9ULF5 831 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 PCDHB12Q9Y5F1 795 aa15.26■□□□□ 0.03
TRIM3-215ENST00000639856 J3KR12 359 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 LILRB3O75022 631 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 PMPCBO75439 489 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 FGBP02675 491 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 NDST2P52849 883 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 VEPH1Q14D04 833 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 UGP2Q16851 508 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 DNAJB7Q7Z6W7 309 aaPredicted RBP15.25■□□□□ 0.03
TRIM3-215ENST00000639856 TMEM150AQ86TG1 271 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 LGI2Q8N0V4 545 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 FIBCD1Q8N539 461 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 TEX9Q8N6V9 391 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 WBP2Q969T9 261 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 MCUR1Q96AQ8 359 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 MRGPRX2Q96LB1 330 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 CDK5RAP1Q96SZ6 601 aaKnown RBP15.25■□□□□ 0.03
TRIM3-215ENST00000639856 ANKRD6Q9Y2G4 727 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 TCAF1Q9Y4C2 921 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 OBSL1O75147 1896 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 DRGXA6NNA5 263 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 VAPBO95292 243 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 PEX11BO96011 259 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 AHSGP02765 367 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 KLKB1P03952 638 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 CNPP09543 421 aaKnown RBP15.25■□□□□ 0.03
TRIM3-215ENST00000639856 ALOX15P16050 662 aaPredicted RBP15.25■□□□□ 0.03
TRIM3-215ENST00000639856 ELF1P32519 619 aa15.25■□□□□ 0.03
TRIM3-215ENST00000639856 ARCN1P48444 511 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms