RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 CELA2BP08218 269 aaPredicted RBP15.25■□□□□ 0.03
SYNE2-228ENST00000639659 IGFALSP35858 605 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 ACVRL1P37023 503 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 MORC3Q14149 939 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 C2CD6Q53TS8 623 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 TAF3Q5VWG9 929 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 RWDD4Q6NW29 188 aaKnown RBP15.25■□□□□ 0.03
SYNE2-228ENST00000639659 IGF2-ASQ6U949 168 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 ZNF397Q8NF99 534 aaPredicted RBP15.25■□□□□ 0.03
SYNE2-228ENST00000639659 KLHL32Q96NJ5 620 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 CCNL2Q96S94 520 aaPredicted RBP15.25■□□□□ 0.03
SYNE2-228ENST00000639659 BOCQ9BWV1 1114 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 C1QTNF2Q9BXJ5 285 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 FOXP3Q9BZS1 431 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 ZYG11BQ9C0D3 744 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 DNAJC12Q9UKB3 198 aa15.25■□□□□ 0.03
SYNE2-228ENST00000639659 DOCK4Q8N1I0 1966 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 TPP1O14773 563 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 LZTS3O60299 673 aaPredicted RBP15.24■□□□□ 0.03
SYNE2-228ENST00000639659 MMP20O60882 483 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 ZMPSTE24O75844 475 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 ITGA2BP08514 1039 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 HGFP14210 728 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 TSHRP16473 764 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 MTIF2P46199 727 aaKnown RBP15.24■□□□□ 0.03
SYNE2-228ENST00000639659 PDX1P52945 283 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 PFN3P60673 137 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 ATP11AP98196 1134 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 NFKB2Q00653 900 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 SRSF6Q13247 344 aaKnown RBP15.24■□□□□ 0.03
SYNE2-228ENST00000639659 POLD3Q15054 466 aaPredicted RBP15.24■□□□□ 0.03
SYNE2-228ENST00000639659 ZNF805Q5CZA5 627 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 ATXN7L2Q5T6C5 722 aaPredicted RBP15.24■□□□□ 0.03
SYNE2-228ENST00000639659 USP53Q70EK8 1073 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 RD3Q7Z3Z2 195 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 B3GNT8Q7Z7M8 397 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 ZDHHC17Q8IUH5 632 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 HID1Q8IV36 788 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 PIAS4Q8N2W9 510 aaPredicted RBP15.24■□□□□ 0.03
SYNE2-228ENST00000639659 SDR16C5Q8N3Y7 309 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 FBXO39Q8N4B4 442 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 KYQ8NBH2 561 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 DENND6BQ8NEG7 585 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 PCDH19Q8TAB3 1148 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 CXorf40AQ8TE69 158 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 SNRNP27Q8WVK2 155 aaKnown RBP15.24■□□□□ 0.03
SYNE2-228ENST00000639659 CCDC74AQ96AQ1 378 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 CFAP57Q96MR6 1250 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 LENG8Q96PV6 779 aaPredicted RBP15.24■□□□□ 0.03
SYNE2-228ENST00000639659 WRAP53Q9BUR4 548 aaKnown RBP15.24■□□□□ 0.03
SYNE2-228ENST00000639659 DNAI1Q9UI46 699 aa15.24■□□□□ 0.03
SYNE2-228ENST00000639659 PNMA8BQ9ULN7 279 aaPredicted RBP15.24■□□□□ 0.03
SYNE2-228ENST00000639659 MAST4O15021 2626 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 IGLV3-10A0A075B6K4 115 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 LMO7DNF2Z398 122 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 PLD2O14939 933 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 YY2O15391 372 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 CTSEP14091 401 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 PON1P27169 355 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 SLC5A2P31639 672 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 FLT3P36888 993 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 EIF4A3P38919 411 aaKnown RBP15.23■□□□□ 0.03
SYNE2-228ENST00000639659 SKOR1P84550 965 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 PPARDQ03181 441 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 SLC20A2Q08357 652 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 RAPGEF1Q13905 1077 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 TGIF1Q15583 401 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 CDO1Q16878 200 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 SLC25A52Q3SY17 297 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 ZNF783Q6ZMS7 281 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 RAB11FIP2Q7L804 512 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 CLEC14AQ86T13 490 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 ZSCAN30Q86W11 494 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 NETO2Q8NC67 525 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 TMEM35BQ8NCS4 154 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 WDR48Q8TAF3 677 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 RAB7BQ96AH8 199 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 C18orf8Q96DM3 657 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 C1orf74Q96LT6 269 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 GFM1Q96RP9 751 aaKnown RBP15.23■□□□□ 0.03
SYNE2-228ENST00000639659 CPEB1Q9BZB8 566 aaKnown RBP15.23■□□□□ 0.03
SYNE2-228ENST00000639659 CLPBQ9H078 707 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 PISDQ9UG56 409 aa15.23■□□□□ 0.03
SYNE2-228ENST00000639659 HECTD1Q9ULT8 2610 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 FOXN3O00409 490 aaPredicted RBP15.22■□□□□ 0.03
SYNE2-228ENST00000639659 TM7SF2O76062 418 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 GJB6O95452 261 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 RPLP0P05388 317 aaKnown RBP15.22■□□□□ 0.03
SYNE2-228ENST00000639659 JMJD7P0C870 316 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 ITIH2P19823 946 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 XPAP23025 273 aaPredicted RBP15.22■□□□□ 0.03
SYNE2-228ENST00000639659 UGT1A5P35504 534 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 CLCN1P35523 988 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 SNRPD1P62314 119 aaKnown RBP15.22■□□□□ 0.03
SYNE2-228ENST00000639659 KLHL40Q2TBA0 621 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 FOXR2Q6PJQ5 311 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 MACC1Q6ZN28 852 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 TTC7BQ86TV6 843 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 XYLT1Q86Y38 959 aa15.22■□□□□ 0.03
SYNE2-228ENST00000639659 EXD3Q8N9H8 876 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms