RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 B4GALT5O43286 388 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 CYTH3O43739 400 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 KLK8O60259 260 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 RNASEH2AO75792 299 aaKnown RBP3.57□□□□□ -1.84
CCDC7-213ENST00000639290 MLYCDO95822 493 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 GGT5P36269 586 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 EIF4A3P38919 411 aaKnown RBP3.57□□□□□ -1.84
CCDC7-213ENST00000639290 NAMPTP43490 491 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 NLRP5P59047 1200 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 SPAG1Q07617 926 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 PCBP2Q15366 365 aaKnown RBP eCLIP3.57□□□□□ -1.84
CCDC7-213ENST00000639290 C11orf91Q3C1V1 193 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 PRAMEF17Q5VTA0 474 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 CASC1Q6TDU7 716 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 SHISA2Q6UWI4 295 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 RBFAQ8N0V3 343 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 C3orf56Q8N813 242 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 ANKRD20A12PQ8NF67 263 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 MYCBPAPQ8TBZ2 947 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 THAP3Q8WTV1 239 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-213ENST00000639290 FAM222BQ8WU58 562 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 CCDC74BQ96LY2 380 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 LENG8Q96PV6 779 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-213ENST00000639290 VKORC1Q9BQB6 163 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 NT5C1AQ9BXI3 368 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 ZNF700Q9H0M5 742 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 BOLA2Q9H3K6 86 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 ARNT2Q9HBZ2 717 aa3.57□□□□□ -1.84
CCDC7-213ENST00000639290 SCHIP1Q9P0W5 487 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-213ENST00000639290 UBQLN1Q9UMX0 589 aaKnown RBP3.57□□□□□ -1.84
CCDC7-213ENST00000639290 TMEM89A2RUT3 159 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 ARGFXA6NJG6 315 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 A8MV72 311 aaPredicted RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 SMAD7O15105 426 aaKnown RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 SMPD2O60906 423 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 CRYABP02511 175 aaKnown RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 ATP5BP06576 529 aaKnown RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 PLA2G4BP0C869 781 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 CASP14P31944 242 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 CHKAP35790 457 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 SCTRP47872 440 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 ANTXR2P58335 489 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 MYBPC3Q14896 1274 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 ZNF169Q14929 603 aaPredicted RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 ACOX1Q15067 660 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 KYAT1Q16773 422 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 DDR2Q16832 855 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 C8orf34Q49A92 452 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 IFIT1BQ5T764 474 aaKnown RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 CPZQ66K79 652 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 ANKS6Q68DC2 871 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 PPP4R4Q6NUP7 873 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 GCNT7Q6ZNI0 430 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 MIER3Q7Z3K6 550 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 YTHDF3Q7Z739 585 aaKnown RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 ACOT1Q86TX2 421 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 C4orf19Q8IY42 314 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 SLC22A18ASQ8N1D0 253 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 CPXM2Q8N436 756 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 B3GALNT2Q8NCR0 500 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 OR13H1Q8NG92 308 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 OR14C36Q8NHC7 312 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 OTUD7AQ8TE49 926 aaPredicted RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 ADAMTS17Q8TE56 1095 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 EPS8L3Q8TE67 593 aaKnown RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TMEM143Q96AN5 459 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 ABI2Q9NYB9 513 aaPredicted RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TNFSF13BQ9Y275 285 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 HCFC1P51610 2035 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TBC1D3DA0A087WVF3 549 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TBC1D3IA0A087WXS9 549 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TBC1D3EA0A087X179 549 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TBC1D3KA0A087X1G2 549 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 A0A1W2PP55 124 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TBC1D3FA6NER0 549 aaPredicted RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TBC1D3LB9A6J9 549 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 FAM157AC9JC47 383 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 SOCS6O14544 535 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TRIM24O15164 1050 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 ALOX15BO15296 676 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 NEBLO76041 1014 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 SOX30O94993 753 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 NDUFA10O95299 355 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 MATN4O95460 622 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TBC1D3HP0C7X1 549 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 MCF2P10911 925 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 UGT1A4P22310 534 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 F8A1P23610 371 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 PTPN4P29074 926 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 EFNA5P52803 228 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 METAP1P53582 386 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 YPEL5P62699 121 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 PTSQ03393 145 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TRIM29Q14134 588 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 GEN1Q17RS7 908 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 HNRNPA1L2Q32P51 320 aaKnown RBP3.56□□□□□ -1.84
CCDC7-213ENST00000639290 GLRA4Q5JXX5 417 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 ABHD17BQ5VST6 288 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 FAM46CQ5VWP2 391 aa3.56□□□□□ -1.84
CCDC7-213ENST00000639290 TBC1D3GQ6DHY5 549 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms