RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TOP1MTQ969P6 601 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 CELF6Q96J87 481 aaKnown RBP20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 RBM38Q9H0Z9 239 aaKnown RBP20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 PADI4Q9UM07 663 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 PCDHGB4Q9UN71 923 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 PCDHGB5Q9Y5G0 923 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 SNX10Q9Y5X0 201 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 NUP205Q92621 2012 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 H0YJX3 145 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 ANXA9O76027 345 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 PYGLP06737 847 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 ATP5F1P24539 256 aaPredicted RBP20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 ARCN1P48444 511 aaKnown RBP20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 CTBP1Q13363 440 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 APOFQ13790 326 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 ZNF460Q14592 562 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 MAPRE2Q15555 327 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 MFSD6LQ8IWD5 586 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 METTL25Q8N6Q8 603 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 ARRDC4Q8NCT1 418 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 ZMIZ2Q8NF64 920 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 FAR2Q96K12 515 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 FCRL5Q96RD9 977 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 APPL1Q9UKG1 709 aa20.34■□□□□ 0.85
SYNGAP1-227ENST00000638142 TMEM233B4DJY2 109 aa20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 RABGGTBP53611 331 aa20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 CDKL1Q00532 357 aa20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 POU6F1Q14863 301 aa20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 C6orf52Q5T4I8 152 aa20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 POTEHQ6S545 545 aa20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 CHSY3Q70JA7 882 aa20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 TXNDC5Q8NBS9 432 aaKnown RBP20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 SPATA22Q8NHS9 363 aa20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 SLC2A11Q9BYW1 496 aa20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 MRM3Q9HC36 420 aaKnown RBP20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 DMTF1Q9Y222 760 aa20.33■□□□□ 0.85
SYNGAP1-227ENST00000638142 RNASEH2AO75792 299 aaKnown RBP20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 C8BP07358 591 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 CCNCP24863 283 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 PSME3P61289 254 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 STX5Q13190 355 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 KLHDC10Q6PID8 442 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 TRIM67Q6ZTA4 783 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 GALNT4Q8N4A0 578 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 SMG8Q8ND04 991 aaKnown RBP20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 USP33Q8TEY7 942 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 PRPF18Q99633 342 aaKnown RBP20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 OMDQ99983 421 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 FTHL17Q9BXU8 183 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 POMKQ9H5K3 350 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 ADA2Q9NZK5 511 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 PCDHGA7Q9Y5G6 932 aa20.33■□□□□ 0.84
SYNGAP1-227ENST00000638142 ARNTP27540 789 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 CD151P48509 253 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 ATXN3P54252 364 aaPredicted RBP20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 TRIM25Q14258 630 aaKnown RBP20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 ADRM1Q16186 407 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 ESRP1Q6NXG1 681 aaKnown RBP20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 AFAP1L2Q8N4X5 818 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 DNAJB3Q8WWF6 145 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 CDCA5Q96FF9 252 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 PCED1BQ96HM7 432 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 ELMO2Q96JJ3 720 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 GRIP2Q9C0E4 1043 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 UNC93B1Q9H1C4 597 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 GTSE1Q9NYZ3 720 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 HSFX1Q9UBD0 423 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 TCAF1Q9Y4C2 921 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 PTCH2Q9Y6C5 1203 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 PTGESO14684 152 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 DDNO94850 711 aaPredicted RBP20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 PAMP19021 973 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 TCN1P20061 433 aaPredicted RBP20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 SLC1A2P43004 574 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 LHX1P48742 406 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 TAS2R39P59534 338 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 POU4F1Q01851 419 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 GK3PQ14409 553 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 PSMD5Q16401 504 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 DENND5AQ6IQ26 1287 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 BORAQ6PGQ7 559 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 GK5Q6ZS86 529 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 BHLHA9Q7RTU4 235 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 TMEM86AQ8N2M4 240 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 C2CD4AQ8NCU7 369 aaPredicted RBP20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 IPMKQ8NFU5 416 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 EDEM1Q92611 657 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 SENP8Q96LD8 212 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 FAM210AQ96ND0 272 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 PPP1R2P1Q96PQ5 205 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 PPP1R10Q96QC0 940 aaKnown RBP20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 HACD3Q9P035 362 aa20.32■□□□□ 0.84
SYNGAP1-227ENST00000638142 KCNU1A8MYU2 1149 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 F2P00734 622 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 ATP6V1B1P15313 513 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 ZNF26P17031 533 aaPredicted RBP20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 INHBCP55103 352 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 SULT2A1Q06520 285 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 SQLEQ14534 574 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms