RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 NRDE2Q9H7Z3 1164 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 GPN1Q9HCN4 374 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 MRPS7Q9Y2R9 242 aaKnown RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 NRKQ7Z2Y5 1582 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ELFN1P0C7U0 828 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PGAM1P18669 254 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CAP2P40123 477 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 NPTX2P47972 431 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 RPIAP49247 311 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 TOB2Q14106 344 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 XKR6Q5GH73 641 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CERCAMQ5T4B2 595 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 C11orf63Q6NUN7 778 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 TAS1R3Q7RTX0 852 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 STK32CQ86UX6 486 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 FAM124AQ86V42 546 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 LIX1Q8N485 282 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CISHQ9NSE2 258 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 COG5Q9UP83 839 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CDC42BPBQ9Y5S2 1711 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ABCA8O94911 1581 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 TTC37Q6PGP7 1564 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 MAPKBP1O60336 1514 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 UBXN7O94888 489 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 VIPP01282 170 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 AQP5P55064 265 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ITIH4Q14624 930 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ATP13A5Q4VNC0 1218 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 RAB11FIP2Q7L804 512 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 MB21D2Q8IYB1 491 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 OR2L3Q8NG85 312 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 FDXACB1Q9BRP7 624 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CRISPLD1Q9H336 500 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 GJB4Q9NTQ9 266 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 IFT52Q9Y366 437 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 LOC100506127A0A0U1RQW1 187 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ZSCAN5CA6NGD5 496 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ULK1O75385 1050 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 FOSL2P15408 326 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 SLC6A2P23975 617 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 KCNJ1P48048 391 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CASP6P55212 293 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 RGS8P57771 180 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PLGLB1Q02325 96 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 NAB1Q13506 487 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ANXA8L1Q5VT79 327 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PACS2Q86VP3 889 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 SLC26A11Q86WA9 606 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 GPALPP1Q8IXQ4 340 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 TPCN2Q8NHX9 752 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PSMA8Q8TAA3 256 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CERKQ8TCT0 537 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 APBA2Q99767 749 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 TAPBPLQ9BX59 468 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ANKZF1Q9H8Y5 726 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CXCL11O14625 94 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 HAT1O14929 419 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 RAD51CO43502 376 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 MICAL2O94851 1124 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PRKAR1AP10644 381 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 YBX3P16989 372 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CAPGP40121 348 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ERVK-21P61565 698 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 HSF2Q03933 536 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PTPN11Q06124 597 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 HSPA14Q0VDF9 509 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 IQSEC1Q6DN90 963 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF227Q86WZ6 799 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PHC3Q8NDX5 983 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ATP6V1C2Q8NEY4 427 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CELF6Q96J87 481 aaKnown RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 C1orf50Q9BV19 199 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 POMKQ9H5K3 350 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 LDAHQ9H6V9 325 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 SLC28A3Q9HAS3 691 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 TRIM39Q9HCM9 518 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 EHD3Q9NZN3 535 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 GTF3C4Q9UKN8 822 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ANKRD65E5RJM6 399 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 NOL4O94818 638 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CXCL14O95715 111 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 FAM58BPP0C7Q3 252 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 MTHFD1P11586 935 aaKnown RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ADORA2AP29274 412 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CDC25CP30307 473 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PPP3R1P63098 170 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PPP2R2BQ00005 443 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 MSLNQ13421 630 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 EPC2Q52LR7 807 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 SEZ6Q53EL9 994 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 KLHDC7AQ5VTJ3 777 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PAPD7Q5XG87 772 aaKnown RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 BEND5Q7L4P6 421 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CHST15Q7LFX5 561 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF276Q8N554 614 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 TSEN15Q8WW01 171 aaKnown RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 VAT1Q99536 393 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PCDH12Q9NPG4 1184 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 RHBDL2Q9NX52 303 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms