RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 PPIDQ08752 370 aaKnown RBP9.86□□□□□ -0.83
LINC00339-210ENST00000635675 SPEM2Q0P670 501 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 CCDC15Q0P6D6 951 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 HNRNPDQ14103 355 aaKnown RBP9.86□□□□□ -0.83
LINC00339-210ENST00000635675 TFDP2Q14188 446 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 LLGL1Q15334 1064 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 CSRP2Q16527 193 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 PPP2R5EQ16537 467 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 ZNF805Q5CZA5 627 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 MARC1Q5VT66 337 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 PEAR1Q5VY43 1037 aaPredicted RBP9.86□□□□□ -0.83
LINC00339-210ENST00000635675 NCEH1Q6PIU2 408 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 NPNTQ6UXI9 565 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 GDPD4Q6W3E5 623 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 ERN2Q76MJ5 926 aaKnown RBP9.86□□□□□ -0.83
LINC00339-210ENST00000635675 CYP2U1Q7Z449 544 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 SRLQ86TD4 932 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 ZSCAN30Q86W11 494 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 SYT12Q8IV01 421 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 CCDC50Q8IVM0 306 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 PGBD5Q8N414 524 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 OR2T34Q8NGX1 318 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 OR14C36Q8NHC7 312 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 C1orf216Q8TAB5 229 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 LRRN4Q8WUT4 740 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 UBE2Q2Q8WVN8 375 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 PIGKQ92643 395 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 BIRC7Q96CA5 298 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 HDAC11Q96DB2 347 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 HES6Q96HZ4 224 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 PPP1R16AQ96I34 528 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 NSMCE3Q96MG7 304 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 OLFM3Q96PB7 478 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 LGMNQ99538 433 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 CINPQ9BW66 212 aaPredicted RBP9.86□□□□□ -0.83
LINC00339-210ENST00000635675 DYRK4Q9NR20 520 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 DKK3Q9UBP4 350 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 EFR3BQ9Y2G0 817 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 PPP2R2CQ9Y2T4 447 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.86□□□□□ -0.83
LINC00339-210ENST00000635675 FAM47DPA6NHR8 397 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 C16orf96A6NNT2 1141 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 DDX3YO15523 660 aaKnown RBP9.85□□□□□ -0.83
LINC00339-210ENST00000635675 GJB3O75712 270 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 PYGMP11217 842 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 ADRB3P13945 408 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 PECAM1P16284 738 aaPredicted RBP9.85□□□□□ -0.83
LINC00339-210ENST00000635675 CR2P20023 1033 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 MAOBP27338 520 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 PTPN7P35236 360 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 HOXD12P35452 270 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 DPP6P42658 865 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 MMP13P45452 471 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 SCNN1BP51168 640 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 CCR5P51681 352 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 NEK3P51956 506 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 ZNF235Q14590 738 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 GRM3Q14832 879 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 PDK1Q15118 436 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 CCDC6Q16204 474 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 HS1BP3Q53T59 392 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 WDR45BQ5MNZ6 344 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 SYCP2LQ5T4T6 812 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 DCAF12L1Q5VU92 463 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 KAZNQ674X7 775 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 KIAA0895LQ68EN5 471 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 TIGD7Q6NT04 549 aaPredicted RBP9.85□□□□□ -0.83
LINC00339-210ENST00000635675 BBS12Q6ZW61 710 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 PARS2Q7L3T8 475 aaKnown RBP9.85□□□□□ -0.83
LINC00339-210ENST00000635675 GPR161Q8N6U8 529 aaKnown RBP9.85□□□□□ -0.83
LINC00339-210ENST00000635675 CCNYQ8ND76 341 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 HCAR2Q8TDS4 363 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 NSMCE1Q8WV22 266 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 ZNF641Q96N77 438 aaPredicted RBP9.85□□□□□ -0.83
LINC00339-210ENST00000635675 KLHL32Q96NJ5 620 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 NUDCD1Q96RS6 583 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 TUBGCP5Q96RT8 1024 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 HINFPQ9BQA5 517 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 MGME1Q9BQP7 344 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 ORAI3Q9BRQ5 295 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 HERPUD2Q9BSE4 406 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 HEMGNQ9BXL5 484 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 BRD8Q9H0E9 1235 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 LZTFL1Q9NQ48 299 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 VPS45Q9NRW7 570 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 SEMA4GQ9NTN9 838 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 SAE1Q9UBE0 346 aaPredicted RBP9.85□□□□□ -0.83
LINC00339-210ENST00000635675 PACSIN2Q9UNF0 486 aaPredicted RBP9.85□□□□□ -0.83
LINC00339-210ENST00000635675 PI4KAP42356 2102 aa9.85□□□□□ -0.83
LINC00339-210ENST00000635675 TBC1D3DA0A087WVF3 549 aa9.84□□□□□ -0.83
LINC00339-210ENST00000635675 TBC1D3IA0A087WXS9 549 aa9.84□□□□□ -0.83
LINC00339-210ENST00000635675 TBC1D3EA0A087X179 549 aa9.84□□□□□ -0.83
LINC00339-210ENST00000635675 TBC1D3KA0A087X1G2 549 aa9.84□□□□□ -0.83
LINC00339-210ENST00000635675 TSPAN11A1L157 253 aa9.84□□□□□ -0.83
LINC00339-210ENST00000635675 TTC24A2A3L6 582 aaPredicted RBP9.84□□□□□ -0.83
LINC00339-210ENST00000635675 TBC1D3FA6NER0 549 aaPredicted RBP9.84□□□□□ -0.83
LINC00339-210ENST00000635675 MEI4A8MW99 385 aa9.84□□□□□ -0.83
LINC00339-210ENST00000635675 ESPNB1AK53 854 aa9.84□□□□□ -0.83
LINC00339-210ENST00000635675 TBC1D3LB9A6J9 549 aa9.84□□□□□ -0.83
LINC00339-210ENST00000635675 LATO43561 262 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms