RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 TOGARAM2Q6ZUX3 1019 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 CREB3L2Q70SY1 520 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 RAB11FIP2Q7L804 512 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 C16orf82Q7Z2V1 217 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 ANKS1BQ7Z6G8 1248 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 IGFN1Q86VF2 1251 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 CCDC25Q86WR0 208 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 PALB2Q86YC2 1186 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 KLBQ86Z14 1044 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 MUC20Q8N307 709 aaPredicted RBP1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 DPP10Q8N608 796 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 SAMD3Q8N6K7 520 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 ARL14EPQ8N8R7 260 aaPredicted RBP1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 FSIP1Q8NA03 581 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 SCAMP5Q8TAC9 235 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 BCAS4Q8TDM0 211 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 CLEC4CQ8WTT0 213 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 ASB12Q8WXK4 309 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 IP6K1Q92551 441 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 NPIPB3Q92617 1050 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 ARRDC3Q96B67 414 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 HES6Q96HZ4 224 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 RBM17Q96I25 401 aaKnown RBP1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF845Q96IR2 970 aaPredicted RBP1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 SCLT1Q96NL6 688 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF347Q96SE7 839 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 RMDN3Q96TC7 470 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 PSMD1Q99460 953 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 IFT27Q9BW83 186 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 C1QTNF4Q9BXJ3 329 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 RNF26Q9BY78 433 aaPredicted RBP1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 DCLK3Q9C098 648 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 ACAD9Q9H845 621 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 CHODLQ9H9P2 273 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 ARL15Q9NXU5 204 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 NDUFAF4Q9P032 175 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 CDH22Q9UJ99 828 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 KCND3Q9UK17 655 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 SUFUQ9UMX1 484 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 DHDHQ9UQ10 334 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 CNTN6Q9UQ52 1028 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 LAMP3Q9UQV4 416 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 SCN5AQ14524 2016 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 FRMPD3Q5JV73 1810 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 PTPRTO14522 1441 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 NPATQ14207 1427 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 FMN1Q68DA7 1419 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 OTOFQ9HC10 1997 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 MYH3P11055 1940 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 AK9Q5TCS8 1911 aa1.21□□□□□ -2.22
SMARCB1-209ENST00000635578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.21□□□□□ -2.227e-16■■■■■ 28.1
SMARCB1-209ENST00000635578 TRPM7Q96QT4 1865 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 CDK5RAP2Q96SN8 1893 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ECM29Q5VYK3 1845 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 MYH14Q7Z406 1995 aaKnown RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 IGKV3D-20A0A0C4DH25 116 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 OR2W5A6NFC9 320 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 SAC3D1A6NKF1 404 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 OR6C75A6NL08 312 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC38A8A6NNN8 435 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 BECN2A8MW95 431 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 INAFM1C9JVW0 142 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 H0Y3Z8 333 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 SYT5O00445 386 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ACKR2O00590 384 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 SEPT4O43236 478 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 STRNO43815 780 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 CBFA2T3O75081 653 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 CYP1A2P05177 515 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 RFPL3SP0C7P2 107 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 CYP4B1P13584 511 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 GM2AP17900 193 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 PRKCHP24723 683 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 PDIA3P30101 505 aaKnown RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 HSPA1LP34931 641 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 RFC1P35251 1148 aaPredicted RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 SERPINF1P36955 418 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 HTR3AP46098 478 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ZNF84P51523 738 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 PRKAA2P54646 552 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 FAM3BP58499 235 aaPredicted RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ROR2Q01974 943 aaKnown RBP1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 TLE3Q04726 772 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 CDK18Q07002 472 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 DMWDQ09019 674 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 CUL4BQ13620 913 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 MORC3Q14149 939 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 GPR18Q14330 331 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 POSTNQ15063 836 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 PGM5Q15124 567 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 TAF12Q16514 161 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 GRAMD1BQ3KR37 738 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ADCK5Q3MIX3 580 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 GALNTL6Q49A17 601 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 GXYLT1Q4G148 440 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 KIAA1755Q5JYT7 1200 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ENTPD8Q5MY95 495 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 FAM171A1Q5VUB5 890 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 ADAM5Q6NVV9 412 aa1.2□□□□□ -2.22
SMARCB1-209ENST00000635578 SLC30A9Q6PML9 568 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms