RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 GPSM1Q86YR5 675 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 NR1H4Q96RI1 486 aaPredicted RBP11.85□□□□□ -0.51
CHD2-205ENST00000625662 SLC32A1Q9H598 525 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 OSGEPQ9NPF4 335 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 TLR6Q9Y2C9 796 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 MTO1Q9Y2Z2 717 aaKnown RBP11.85□□□□□ -0.51
CHD2-205ENST00000625662 MGAT1P26572 445 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 VARSP26640 1264 aaKnown RBP11.85□□□□□ -0.51
CHD2-205ENST00000625662 FMO4P31512 558 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 RFX3P48380 749 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 GPR15P49685 360 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 NEK3P51956 506 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 TRIM68Q6AZZ1 485 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 APLFQ8IW19 511 aaPredicted RBP11.85□□□□□ -0.51
CHD2-205ENST00000625662 CCDC33Q8N5R6 958 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 ZSCAN1Q8NBB4 408 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 SRFBP1Q8NEF9 429 aaKnown RBP11.85□□□□□ -0.51
CHD2-205ENST00000625662 STAG3L4Q8TBR4 150 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 ATG4AQ8WYN0 398 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 AP2M1Q96CW1 435 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 SGF29Q96ES7 293 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 MYOCQ99972 504 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 PRRG3Q9BZD7 231 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 TRIT1Q9H3H1 467 aaKnown RBP11.85□□□□□ -0.51
CHD2-205ENST00000625662 PARVBQ9HBI1 364 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 PNPLA8Q9NP80 782 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 PLK2Q9NYY3 685 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 PHTF1Q9UMS5 762 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 ASF1AQ9Y294 204 aa11.85□□□□□ -0.51
CHD2-205ENST00000625662 C5orf60A6NFR6 353 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 KRT75O95678 551 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 PIM1P11309 404 aaPredicted RBP11.84□□□□□ -0.51
CHD2-205ENST00000625662 HOXB2P14652 356 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 TSHRP16473 764 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 NFKB1P19838 968 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 IL10RBQ08334 325 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 MILR1Q7Z6M3 343 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 SRLQ86TD4 932 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 CDK20Q8IZL9 346 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 FAM83DQ9H4H8 585 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 TMPRSS4Q9NRS4 437 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 ATAD3AQ9NVI7 634 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 DCTN4Q9UJW0 460 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 SNX6Q9UNH7 406 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 AP3M1Q9Y2T2 418 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 SEC31AO94979 1220 aaKnown RBP11.84□□□□□ -0.51
CHD2-205ENST00000625662 SYPP08247 313 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 IRF8Q02556 426 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 MSLNQ13421 630 aaPredicted RBP11.84□□□□□ -0.51
CHD2-205ENST00000625662 CUL3Q13618 768 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 HIC1Q14526 733 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 CARD16Q5EG05 197 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 ZSCAN18Q8TBC5 510 aaPredicted RBP11.84□□□□□ -0.51
CHD2-205ENST00000625662 P2RY13Q9BPV8 354 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 STRADBQ9C0K7 418 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 RETREG1Q9H6L5 497 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 GDAP2Q9NXN4 497 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 SNTNA6NMZ2 147 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 A8MX80 341 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 NDST3O95803 873 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 PBX3P40426 434 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 HSPA14Q0VDF9 509 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 RALGPS1Q5JS13 557 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 ADGRF1Q5T601 910 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 CATSPER1Q8NEC5 780 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 RFWD2Q8NHY2 731 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 PTCD2Q8WV60 388 aaKnown RBP11.84□□□□□ -0.51
CHD2-205ENST00000625662 ZNF599Q96NL3 588 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 DIABLOQ9NR28 239 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 ETNK2Q9NVF9 386 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 ZDHHC7Q9NXF8 308 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 BTN3A1O00481 513 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 TPH1P17752 444 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 CCNCP24863 283 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 GPD2P43304 727 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 ATP6V0D1P61421 351 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 CCZ1BP86790 482 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 CCZ1P86791 482 aaPredicted RBP11.84□□□□□ -0.51
CHD2-205ENST00000625662 DNAL1Q4LDG9 190 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 BEND6Q5SZJ8 279 aaPredicted RBP11.84□□□□□ -0.51
CHD2-205ENST00000625662 BBS12Q6ZW61 710 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 GKN2Q86XP6 184 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 OR10G6Q8NH81 332 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 WDR48Q8TAF3 677 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 MS4A4AQ96JQ5 239 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 KCNK16Q96T55 309 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 ACOX2Q99424 681 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 PACSIN1Q9BY11 444 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 DNAJC16Q9Y2G8 782 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 KCNE2Q9Y6J6 123 aa11.84□□□□□ -0.51
CHD2-205ENST00000625662 GLYATL1P3A0A0U1RQE8 302 aa11.83□□□□□ -0.51
CHD2-205ENST00000625662 RNF103-CHMP3A0A140T963 221 aa11.83□□□□□ -0.51
CHD2-205ENST00000625662 PJA2O43164 708 aa11.83□□□□□ -0.51
CHD2-205ENST00000625662 RGS14O43566 566 aa11.83□□□□□ -0.51
CHD2-205ENST00000625662 RBL1P28749 1068 aa11.83□□□□□ -0.51
CHD2-205ENST00000625662 TIE1P35590 1138 aa11.83□□□□□ -0.51
CHD2-205ENST00000625662 RXRGP48443 463 aa11.83□□□□□ -0.51
CHD2-205ENST00000625662 DNAJC3Q13217 504 aa11.83□□□□□ -0.51
CHD2-205ENST00000625662 ATP13A5Q4VNC0 1218 aa11.83□□□□□ -0.51
CHD2-205ENST00000625662 LVRNQ6Q4G3 990 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms