RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 DPH1Q9BZG8 443 aa11.23□□□□□ -0.61
DDX41-218ENST00000625286 ZYG11BQ9C0D3 744 aa11.23□□□□□ -0.61
DDX41-218ENST00000625286 ZDHHC6Q9H6R6 413 aa11.23□□□□□ -0.61
DDX41-218ENST00000625286 SYNCQ9H7C4 482 aa11.23□□□□□ -0.61
DDX41-218ENST00000625286 RABGEF1Q9UJ41 708 aa11.23□□□□□ -0.61
DDX41-218ENST00000625286 GOLGA8SH3BPF8 625 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 K7ENP7 123 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 FPGTO14772 594 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 TPP1O14773 563 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 YY2O15391 372 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 TSPAN6O43657 245 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 MMP20O60882 483 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 SCNN1AP37088 669 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 RECQLP46063 649 aaPredicted RBP11.22□□□□□ -0.61
DDX41-218ENST00000625286 CLN3Q13286 438 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 SGCGQ13326 291 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 CAMK4Q16566 473 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 ZNF805Q5CZA5 627 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 ATXN7L2Q5T6C5 722 aaPredicted RBP11.22□□□□□ -0.61
DDX41-218ENST00000625286 BROXQ5VW32 411 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 TAF3Q5VWG9 929 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 RETSATQ6NUM9 610 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 INO80CQ6PI98 192 aaPredicted RBP11.22□□□□□ -0.61
DDX41-218ENST00000625286 B3GNT8Q7Z7M8 397 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 PHLDB2Q86SQ0 1253 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 NOP9Q86U38 636 aaKnown RBP11.22□□□□□ -0.61
DDX41-218ENST00000625286 PLPP6Q8IY26 295 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 TMEM35BQ8NCS4 154 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 ASB12Q8WXK4 309 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 CPA5Q8WXQ8 436 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 ARHGEF2Q92974 986 aaKnown RBP11.22□□□□□ -0.61
DDX41-218ENST00000625286 ISG20Q96AZ6 181 aaKnown RBP11.22□□□□□ -0.61
DDX41-218ENST00000625286 PPP1R16AQ96I34 528 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 LRRC61Q9BV99 259 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 KLC2Q9H0B6 622 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 NOL6Q9H6R4 1146 aaKnown RBP11.22□□□□□ -0.61
DDX41-218ENST00000625286 THSD1Q9NS62 852 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 PPARGC1AQ9UBK2 798 aaKnown RBP11.22□□□□□ -0.61
DDX41-218ENST00000625286 IPO11Q9UI26 975 aaKnown RBP11.22□□□□□ -0.61
DDX41-218ENST00000625286 STAP1Q9ULZ2 295 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 TLN1Q9Y490 2541 aaKnown RBP11.22□□□□□ -0.61
DDX41-218ENST00000625286 PCDHGA8Q9Y5G5 932 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 FHOD1Q9Y613 1164 aa11.22□□□□□ -0.61
DDX41-218ENST00000625286 SCN8AQ9UQD0 1980 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 B8ZZF3 427 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 NTN3O00634 580 aaPredicted RBP11.21□□□□□ -0.61
DDX41-218ENST00000625286 NOBOXO60393 691 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 GJB6O95452 261 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 FGFR1OPO95684 399 aaKnown RBP11.21□□□□□ -0.61
DDX41-218ENST00000625286 UGT2B4P06133 528 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 MMEP08473 750 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 TIMP2P16035 220 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 TSHRP16473 764 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 ADRA1BP35368 520 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 UCNP55089 124 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 ATP11AP98196 1134 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 SRSF6Q13247 344 aaKnown RBP11.21□□□□□ -0.61
DDX41-218ENST00000625286 NR0B2Q15466 257 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 C15orf59Q2T9L4 293 aaPredicted RBP11.21□□□□□ -0.61
DDX41-218ENST00000625286 MYLK3Q32MK0 819 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 CCDC14Q49A88 953 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 PRRT3Q5FWE3 981 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 RBM44Q6ZP01 1051 aaKnown RBP11.21□□□□□ -0.61
DDX41-218ENST00000625286 CLEC14AQ86T13 490 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 VPS36Q86VN1 386 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 PHACTR4Q8IZ21 702 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 EXD3Q8N9H8 876 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 TP53I13Q8NBR0 393 aaPredicted RBP11.21□□□□□ -0.61
DDX41-218ENST00000625286 JOSD2Q8TAC2 188 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 KLHL32Q96NJ5 620 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 IL12RB2Q99665 862 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 OR12D3Q9UGF7 316 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 DNAI1Q9UI46 699 aa11.21□□□□□ -0.61
DDX41-218ENST00000625286 LRP4O75096 1905 aa11.21□□□□□ -0.62
DDX41-218ENST00000625286 LMO7DNF2Z398 122 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 H3BM21 787 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 KRIT1O00522 736 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 INSIG1O15503 277 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 TNFSF15O95150 251 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 C6P13671 934 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 CHRNB2P17787 502 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 RBMS1P29558 406 aaKnown RBP11.2□□□□□ -0.62
DDX41-218ENST00000625286 EIF4A3P38919 411 aaKnown RBP11.2□□□□□ -0.62
DDX41-218ENST00000625286 MTIF2P46199 727 aaKnown RBP11.2□□□□□ -0.62
DDX41-218ENST00000625286 SNX16P57768 344 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 NOMO3P69849 1222 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 TCEA2Q15560 299 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 TGIF1Q15583 401 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 ARL13BQ3SXY8 428 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 LINC00303Q3SY05 128 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 HSP90AA4PQ58FG1 418 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 C6orf132Q5T0Z8 1188 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 KLHDC7AQ5VTJ3 777 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 FOXR1Q6PIV2 292 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 ARCQ7LC44 396 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 SFTPA2Q8IWL1 248 aa11.2□□□□□ -0.62
DDX41-218ENST00000625286 RYBPQ8N488 228 aaPredicted RBP11.2□□□□□ -0.62
DDX41-218ENST00000625286 OR2AP1Q8NGE2 309 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms