RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 COLGALT2Q8IYK4 626 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 ZNF683Q8IZ20 524 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 ACTRT2Q8TDY3 377 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 FATE1Q969F0 183 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 MIEF2Q96C03 454 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 IMP4Q96G21 291 aaKnown RBP8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 ELMO2Q96JJ3 720 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 GPR78Q96P69 363 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 OR52B2Q96RD2 323 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 SHCBP1LQ9BZQ2 653 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 ARNT2Q9HBZ2 717 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 PRDM5Q9NQX1 630 aaPredicted RBP8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 XPR1Q9UBH6 696 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 VTI1BQ9UEU0 232 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 FBXO5Q9UKT4 447 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 LOC100653049A0A140TA62 436 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 HEATR9A2RTY3 570 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 SLCO1B7G3V0H7 640 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 DLX3O60479 287 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 KRT34O76011 436 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 CKBP12277 381 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 ITGAXP20702 1163 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 CDC25CP30307 473 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 GRK4P32298 578 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 PSEN1P49768 467 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 KPNA2P52292 529 aaKnown RBP8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 SLC12A2P55011 1212 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 HTRA3P83110 453 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 POU4F1Q01851 419 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 BTKQ06187 659 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 CUL3Q13618 768 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 ZNF460Q14592 562 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 MS4A13Q5J8X5 152 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 ANO7Q6IWH7 933 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 NEPROQ6NW34 567 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 PGM2L1Q6PCE3 622 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 AAGABQ6PD74 315 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 FRMD7Q6ZUT3 714 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 TFAP2DQ7Z6R9 452 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 SLC25A41Q8N5S1 370 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 GABPB2Q8TAK5 448 aaPredicted RBP8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 PDCD6IPQ8WUM4 868 aaKnown RBP8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 STON2Q8WXE9 905 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 NXNL1Q96CM4 212 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 MOCOSQ96EN8 888 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 HMCESQ96FZ2 354 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 RANBP9Q96S59 729 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 RTKNQ9BST9 563 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 NT5MQ9NPB1 228 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 VPS45Q9NRW7 570 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 TMEM248Q9NWD8 314 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 GMIPQ9P107 970 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 ARHGAP26Q9UNA1 814 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 LRCH1Q9Y2L9 728 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 PCDHB5Q9Y5E4 795 aa8.41□□□□□ -1.06
SND1-IT1-201ENST00000623342 MYLKQ15746 1914 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 PLXNA3P51805 1871 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 FRMPD3Q5JV73 1810 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 GOLGA8QA0A0J9YX86 632 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 GOLGA8OA6NCC3 632 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 GOLGA8NF8WBI6 632 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 GRID2O43424 1007 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 TADA2AO75478 443 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 TFEBP19484 476 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 MAGEA11P43364 429 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 CCR10P46092 362 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 SERPINH1P50454 418 aaKnown RBP8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 TAS2R39P59534 338 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 USP46P62068 366 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 FAM189BP81408 668 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 ITKQ08881 620 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 EFEMP1Q12805 493 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 DLG1Q12959 904 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 VARS2Q5ST30 1063 aaKnown RBP8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 MARC1Q5VT66 337 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 ACAD11Q709F0 780 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 DEFB107AQ8IZN7 70 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 ATP6V0D2Q8N8Y2 350 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 CALML6Q8TD86 181 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 CNDP1Q96KN2 507 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 FAM193BQ96PV7 902 aaPredicted RBP8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 MRPL57Q9BQC6 102 aaKnown RBP8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 MRPL46Q9H2W6 279 aaKnown RBP8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 WDR55Q9H6Y2 383 aaPredicted RBP8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 SP110Q9HB58 689 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 CYP4F11Q9HBI6 524 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 ATP13A1Q9HD20 1204 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 ACSS2Q9NR19 701 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 NDE1Q9NXR1 346 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 IL37Q9NZH6 218 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 ZDHHC2Q9UIJ5 367 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 CDH22Q9UJ99 828 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 SSX2IPQ9Y2D8 614 aa8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 PRG3Q9Y2Y8 225 aaPredicted RBP8.4□□□□□ -1.06
SND1-IT1-201ENST00000623342 IGLV3-10A0A075B6K4 115 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 J3KR12 359 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 NEMP1O14524 444 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 SYN3O14994 580 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 SLC22A2O15244 555 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms