RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 EMC2Q15006 297 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 STK11Q15831 433 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 MSS51Q4VC12 460 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 SNAP47Q5SQN1 464 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 TTC39BQ5VTQ0 682 aaPredicted RBP7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 ANKRD22Q5VYY1 191 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 ABRAXAS1Q6UWZ7 409 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 SPOCD1Q6ZMY3 1216 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 VSIG10LQ86VR7 867 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 TAB3Q8N5C8 712 aaPredicted RBP7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 EFCAB3Q8N7B9 438 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 PIK3C3Q8NEB9 887 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 CMASQ8NFW8 434 aaPredicted RBP7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 OR10Z1Q8NGY1 313 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 FEZF2Q8TBJ5 459 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 SGCDQ92629 289 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 REXO5Q96IC2 774 aaKnown RBP7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 ZBED3Q96IU2 234 aaPredicted RBP7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 BTN2A3PQ96KV6 586 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 KLHL32Q96NJ5 620 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 MCEEQ96PE7 176 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 SENP7Q9BQF6 1050 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 SERHL2Q9H4I8 314 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 CCSER2Q9H7U1 834 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 PCDH9Q9HC56 1237 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 RBAKQ9NYW8 714 aaPredicted RBP7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 SAE1Q9UBE0 346 aaPredicted RBP7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 VPS4AQ9UN37 437 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 CNTNAP2Q9UHC6 1331 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 LCTP09848 1927 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 RLFQ13129 1914 aa7.58□□□□□ -1.2
TRIM49B-202ENST00000622138 hCG_1818297A0A087WSY0 165 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 CCDC195A0A1B0GUA6 201 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TMEM191CA6NGB0 347 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 DGAT1O75907 488 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 CCNKO75909 580 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 APBA3O96018 575 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TMEM191BP0C7N4 346 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 MMP8P22894 467 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 PIK3R1P27986 724 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 RBL1P28749 1068 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 CD40LGP29965 261 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 CCND2P30279 289 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 HSPA1LP34931 641 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 HADHAP40939 763 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 GRM5P41594 1212 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 SERPINB10P48595 397 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 CLCNKBP51801 687 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 GDF10P55107 478 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 ACTR2P61160 394 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 SMARCB1Q12824 385 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 KLF10Q13118 480 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 KRR1Q13601 381 aaKnown RBP7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TAF5Q15542 800 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 INTS11Q5TA45 600 aaKnown RBP7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 ANGEL2Q5VTE6 544 aaKnown RBP7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 CES4AQ5XG92 561 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 FAM171BQ6P995 826 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 ZNF773Q6PK81 442 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 DGLUCYQ7Z3D6 616 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 USP37Q86T82 979 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 FAM83AQ86UY5 434 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 SNX32Q86XE0 403 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TMEM130Q8N3G9 435 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TCAIMQ8N3R3 496 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 FBXL6Q8N531 539 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 KYQ8NBH2 561 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 LHFPL5Q8TAF8 219 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC16A10Q8TF71 515 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 GLT1D1Q96MS3 346 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TEPSINQ96N21 525 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TWNKQ96RR1 684 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 MECRQ9BV79 373 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TARS2Q9BW92 718 aaKnown RBP7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 CHID1Q9BWS9 393 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TRPV6Q9H1D0 765 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 RSPH9Q9H1X1 276 aaPredicted RBP7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 MTRRQ9UBK8 725 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TJP2Q9UDY2 1190 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 CNTN6Q9UQ52 1028 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 STYXL1Q9Y6J8 313 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 SAGE2PA6NJ88 616 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 C3orf70A6NLC5 250 aaPredicted RBP7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 NOP56O00567 594 aaKnown RBP7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TRIM38O00635 465 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 WNT10BO00744 389 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 ACOT8O14734 319 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 NDUFA2O43678 99 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 DNAJB5O75953 348 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 KRT37O76014 449 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 MBL2P11226 248 aaPredicted RBP7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 MATN1P21941 496 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 GSTM2P28161 218 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 SSTR1P30872 391 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 TNFSF9P41273 254 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 CDKN2BP42772 138 aa7.57□□□□□ -1.2
TRIM49B-202ENST00000622138 PTPN9P43378 593 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms