RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ZRANB2O95218 330 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLK1-215ENST00000621181 GLI1P08151 1106 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 ADRB3P13945 408 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 JUNDP17535 347 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 RABIFP47224 123 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 NEK3P51956 506 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 SGCGQ13326 291 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 PDE1CQ14123 709 aaPredicted RBP7.98□□□□□ -1.13
CLK1-215ENST00000621181 KLHL10Q6JEL2 608 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 KIAA1161Q6NSJ0 714 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 C22orf39Q6P5X5 142 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 KYAT3Q6YP21 454 aaKnown RBP7.98□□□□□ -1.13
CLK1-215ENST00000621181 DPY19L3Q6ZPD9 716 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 EFL1Q7Z2Z2 1120 aaKnown RBP7.98□□□□□ -1.13
CLK1-215ENST00000621181 DCAF4L2Q8NA75 395 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 CHST14Q8NCH0 376 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 FEM1CQ96JP0 617 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 BMFQ96LC9 184 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 SLC2A13Q96QE2 648 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 WDR24Q96S15 920 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 CPXM1Q96SM3 734 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 SRRTQ9BXP5 876 aaKnown RBP7.98□□□□□ -1.13
CLK1-215ENST00000621181 HDAC8Q9BY41 377 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 SYNDIG1Q9H7V2 258 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 UBE2TQ9NPD8 197 aaPredicted RBP7.98□□□□□ -1.13
CLK1-215ENST00000621181 ACP6Q9NPH0 428 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 DNAI1Q9UI46 699 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 CNTN6Q9UQ52 1028 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 ENTPD2Q9Y5L3 495 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 HEMK1Q9Y5R4 338 aaPredicted RBP7.98□□□□□ -1.13
CLK1-215ENST00000621181 HS3ST3A1Q9Y663 406 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 CSNK1G3Q9Y6M4 447 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 A0A0D9SEW6 157 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 A0A1W2PNU3 283 aaPredicted RBP7.97□□□□□ -1.13
CLK1-215ENST00000621181 EME2A4GXA9 379 aaPredicted RBP7.97□□□□□ -1.13
CLK1-215ENST00000621181 GOLGA6L9A6NEM1 432 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 CYSRT1A8MQ03 144 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 CDRT15L2A8MXV6 281 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 M0QYT0 321 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 RNF103O00237 685 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 NEMP1O14524 444 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 SMAD6O43541 496 aaKnown RBP7.97□□□□□ -1.13
CLK1-215ENST00000621181 CNTN5O94779 1100 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 TNFSF15O95150 251 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 WISP1O95388 367 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 OR1E1P30953 314 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 USP8P40818 1118 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 RPIAP49247 311 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 DNA2P51530 1060 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 GABPB1Q06547 395 aaPredicted RBP7.97□□□□□ -1.13
CLK1-215ENST00000621181 NFATC3Q12968 1075 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 SPIDRQ14159 915 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 FGL2Q14314 439 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 NR0B2Q15466 257 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 ALFQ53S48 1182 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 TFAP2DQ7Z6R9 452 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 C14orf80Q86SX3 495 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 SETD3Q86TU7 594 aaPredicted RBP7.97□□□□□ -1.13
CLK1-215ENST00000621181 PASD1Q8IV76 773 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 EHBP1Q8NDI1 1231 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 WDR36Q8NI36 951 aaKnown RBP7.97□□□□□ -1.13
CLK1-215ENST00000621181 LMX1AQ8TE12 382 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 GLMNQ92990 594 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 NAT6Q93015 286 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 DHTKD1Q96HY7 919 aaPredicted RBP7.97□□□□□ -1.13
CLK1-215ENST00000621181 CCNL2Q96S94 520 aaPredicted RBP7.97□□□□□ -1.13
CLK1-215ENST00000621181 PSMB7Q99436 277 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 FAM117AQ9C073 453 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 INTS2Q9H0H0 1204 aaKnown RBP7.97□□□□□ -1.13
CLK1-215ENST00000621181 WDCPQ9H6R7 721 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 SYNCQ9H7C4 482 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 GPR27Q9NS67 375 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 ASNSD1Q9NWL6 643 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 SALL4Q9UJQ4 1053 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 FHOD1Q9Y613 1164 aa7.97□□□□□ -1.13
CLK1-215ENST00000621181 PMS2P1A4D2B8 440 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 FPGTO14772 594 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 TPP1O14773 563 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 RAD51BO15315 384 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 ITGA2BP08514 1039 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 ITGB7P26010 798 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 THOP1P52888 689 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 ADKP55263 362 aaKnown RBP7.96□□□□□ -1.13
CLK1-215ENST00000621181 SKOR1P84550 965 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 DRAP1Q14919 205 aaPredicted RBP7.96□□□□□ -1.13
CLK1-215ENST00000621181 HSP90AA4PQ58FG1 418 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 PRRT3Q5FWE3 981 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 LRRC31Q6UY01 552 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 FAM183BPQ6ZVS7 135 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 ENOSF1Q7L5Y1 443 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 BTN2A2Q8WVV5 523 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 TKTL2Q9H0I9 626 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 SPASTQ9UBP0 616 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 APOBEC3BQ9UH17 382 aaKnown RBP7.96□□□□□ -1.13
CLK1-215ENST00000621181 LIMA1Q9UHB6 759 aaKnown RBP7.96□□□□□ -1.13
CLK1-215ENST00000621181 KLF15Q9UIH9 416 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.96□□□□□ -1.13
CLK1-215ENST00000621181 FADS3Q9Y5Q0 445 aa7.96□□□□□ -1.13
CLK1-215ENST00000621181 CCDC187A0A096LP49 1063 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 BICDL2A1A5D9 508 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms