RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PLK2Q9NYY3 685 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 CXXC1Q9P0U4 656 aaPredicted RBP10.05□□□□□ -0.8
VTA1-205ENST00000620996 TCAF1Q9Y4C2 921 aa10.05□□□□□ -0.8
VTA1-205ENST00000620996 PDE4DIPQ5VU43 2346 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 CCL16O15467 120 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 PHGDHO43175 533 aaKnown RBP10.04□□□□□ -0.8
VTA1-205ENST00000620996 CTNNB1P35222 781 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 SERPINB8P50452 374 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 CDH4P55283 916 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 YBEYP58557 167 aaPredicted RBP10.04□□□□□ -0.8
VTA1-205ENST00000620996 NAB1Q13506 487 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 SETDB1Q15047 1291 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 PTAR1Q7Z6K3 402 aaPredicted RBP10.04□□□□□ -0.8
VTA1-205ENST00000620996 ANKLE1Q8NAG6 615 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 OVCA2Q8WZ82 227 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 MRPS31Q92665 395 aaKnown RBP10.04□□□□□ -0.8
VTA1-205ENST00000620996 E2F7Q96AV8 911 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 GRAMD1AQ96CP6 724 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 RMDN1Q96DB5 314 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 IMP4Q96G21 291 aaKnown RBP10.04□□□□□ -0.8
VTA1-205ENST00000620996 VPS39Q96JC1 886 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 TCF25Q9BQ70 676 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 SMG9Q9H0W8 520 aaKnown RBP10.04□□□□□ -0.8
VTA1-205ENST00000620996 IL23AQ9NPF7 189 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 FNIP2Q9P278 1114 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 PLXNA3P51805 1871 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 A0A096LPK6 155 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 MUSKO15146 869 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 GLRA3O75311 464 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 UBOX5O94941 541 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 PEX11BO96011 259 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 C8AP07357 584 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 IRF9Q00978 393 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 ZBTB16Q05516 673 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 CDH18Q13634 790 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 ADGRF1Q5T601 910 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 DENND5AQ6IQ26 1287 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 TPGS1Q6ZTW0 290 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 SLC41A1Q8IVJ1 513 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 HERC6Q8IVU3 1022 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 ELMOD1Q8N336 334 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 ARMC5Q96C12 935 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 GCNAQ96QF7 691 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 KDM4CQ9H3R0 1056 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 ZNF395Q9H8N7 513 aaPredicted RBP10.04□□□□□ -0.8
VTA1-205ENST00000620996 FBXO6Q9NRD1 293 aaPredicted RBP10.04□□□□□ -0.8
VTA1-205ENST00000620996 VPS28Q9UK41 221 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 TLK1Q9UKI8 766 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 A0A1W2PRU2 124 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 KIAA0355O15063 1070 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 TLL1O43897 1013 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 PRAMEF11O60813 436 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 CLDN11O75508 207 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 C1RP00736 705 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 ALDH3A1P30838 453 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 CRHR1P34998 444 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 ETV4P43268 484 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 GLRBP48167 497 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 SLC12A2P55011 1212 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 PRAMEP78395 509 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 ZNF460Q14592 562 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 GRM3Q14832 879 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 FASTKD1Q53R41 847 aaKnown RBP10.04□□□□□ -0.8
VTA1-205ENST00000620996 POTEHQ6S545 545 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 SH2D5Q6ZV89 423 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 MYLK4Q86YV6 388 aaPredicted RBP10.04□□□□□ -0.8
VTA1-205ENST00000620996 C7orf61Q8IZ16 206 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 TNS4Q8IZW8 715 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 ACVR1CQ8NER5 493 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 RFWD2Q8NHY2 731 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 DDI1Q8WTU0 396 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 ELMO2Q96JJ3 720 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 KIFC1Q9BW19 673 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 STARD13Q9Y3M8 1113 aa10.04□□□□□ -0.8
VTA1-205ENST00000620996 NYNRINQ9P2P1 1898 aaKnown RBP10.04□□□□□ -0.8
VTA1-205ENST00000620996 ANKRD33BA6NCL7 494 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 C2orf71A6NGG8 1288 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 TIMM44O43615 452 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 SNAP91O60641 907 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 HSPA8P11142 646 aaKnown RBP10.03□□□□□ -0.8
VTA1-205ENST00000620996 CCNFP41002 786 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 LIMK2P53671 638 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 SIRPB2Q5JXA9 342 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 KDELC1Q6UW63 502 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 CYS1Q717R9 158 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 LDB1Q86U70 411 aaPredicted RBP10.03□□□□□ -0.8
VTA1-205ENST00000620996 TCEAL8Q8IYN2 117 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 SLC22A17Q8WUG5 538 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 CCT6BQ92526 530 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 DDX50Q9BQ39 737 aaKnown RBP10.03□□□□□ -0.8
VTA1-205ENST00000620996 TRIM55Q9BYV6 548 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 RC3H2Q9HBD1 1191 aaKnown RBP10.03□□□□□ -0.8
VTA1-205ENST00000620996 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.03□□□□□ -0.8
VTA1-205ENST00000620996 GGA2Q9UJY4 613 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 LSM7Q9UK45 103 aaKnown RBP10.03□□□□□ -0.8
VTA1-205ENST00000620996 KCTD3Q9Y597 815 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 HEATR9A2RTY3 570 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 BNIP3LO60238 219 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 CACNG3O60359 315 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 DNAJC6O75061 913 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms