RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 HOXD12P35452 270 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 HSPA9P38646 679 aaKnown RBP18.52■□□□□ 0.56
LITAF-220ENST00000620789 NEK3P51956 506 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 RWDD2BP57060 319 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 COPS2P61201 443 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 HNRNPDQ14103 355 aaKnown RBP18.52■□□□□ 0.56
LITAF-220ENST00000620789 GRM3Q14832 879 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 CCDC6Q16204 474 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 CSRP2Q16527 193 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 PPP2R5EQ16537 467 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 MARC1Q5VT66 337 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 KAZNQ674X7 775 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 KIAA0895LQ68EN5 471 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 NPNTQ6UXI9 565 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 PARS2Q7L3T8 475 aaKnown RBP18.52■□□□□ 0.56
LITAF-220ENST00000620789 SRLQ86TD4 932 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 RGL4Q8IZJ4 473 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 GPR161Q8N6U8 529 aaKnown RBP18.52■□□□□ 0.56
LITAF-220ENST00000620789 DNASE2BQ8WZ79 361 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 MAML1Q92585 1016 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 KLHL32Q96NJ5 620 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 TMEM74BQ9NUR3 256 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 PPP2R2CQ9Y2T4 447 aa18.52■□□□□ 0.56
LITAF-220ENST00000620789 SHROOM3Q8TF72 1996 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 TBC1D3DA0A087WVF3 549 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 TBC1D3IA0A087WXS9 549 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 TBC1D3EA0A087X179 549 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 TBC1D3KA0A087X1G2 549 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 TBC1D3FA6NER0 549 aaPredicted RBP18.51■□□□□ 0.55
LITAF-220ENST00000620789 C16orf96A6NNT2 1141 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 C10orf142B7Z368 130 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 TBC1D3LB9A6J9 549 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 CST8O60676 142 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 FSBPO95073 299 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 IGHV4-34P06331 123 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 PTMAP06454 111 aaKnown RBP18.51■□□□□ 0.55
LITAF-220ENST00000620789 TBC1D3HP0C7X1 549 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 ZNF806P0C7X5 589 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 ADRB3P13945 408 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 MMP13P45452 471 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 TAS2R38P59533 333 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 ADCY2Q08462 1091 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 LLGL1Q15334 1064 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 TBC1D3GQ6DHY5 549 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 TBC1D3CQ6IPX1 549 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 TBC1D3Q8IZP1 549 aaPredicted RBP18.51■□□□□ 0.55
LITAF-220ENST00000620789 TEX26Q8N6G2 289 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 UBL4BQ8N7F7 174 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 CCNYQ8ND76 341 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 ALG3Q92685 438 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 BIRC7Q96CA5 298 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 OLFM3Q96PB7 478 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 TUBGCP5Q96RT8 1024 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 SMOC1Q9H4F8 434 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 PREBQ9HCU5 417 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 LZTFL1Q9NQ48 299 aa18.51■□□□□ 0.55
LITAF-220ENST00000620789 PACSIN2Q9UNF0 486 aaPredicted RBP18.51■□□□□ 0.55
LITAF-220ENST00000620789 PIGNO95427 931 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 TGM2P21980 687 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 MAOBP27338 520 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 MAPK8P45983 427 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 NR2C2P49116 596 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 SCNN1BP51168 640 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 CCR5P51681 352 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 AP1S1P61966 158 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 PPIDQ08752 370 aaKnown RBP18.5■□□□□ 0.55
LITAF-220ENST00000620789 PDK1Q15118 436 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 FBXL19Q6PCT2 694 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 BZW1Q7L1Q6 419 aaKnown RBP18.5■□□□□ 0.55
LITAF-220ENST00000620789 CCDC13Q8IYE1 715 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 PGBD5Q8N414 524 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 LRRN4Q8WUT4 740 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 SNX19Q92543 992 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 LGMNQ99538 433 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 MGME1Q9BQP7 344 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 SUSD2Q9UGT4 822 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 EIF2B4Q9UI10 523 aaKnown RBP18.5■□□□□ 0.55
LITAF-220ENST00000620789 TPX2Q9ULW0 747 aaKnown RBP18.5■□□□□ 0.55
LITAF-220ENST00000620789 RALGAPA1Q6GYQ0 2036 aa18.5■□□□□ 0.55
LITAF-220ENST00000620789 PPP1R12AO14974 1030 aaPredicted RBP18.49■□□□□ 0.55
LITAF-220ENST00000620789 DDX3YO15523 660 aaKnown RBP18.49■□□□□ 0.55
LITAF-220ENST00000620789 FOXD2O60548 495 aaPredicted RBP18.49■□□□□ 0.55
LITAF-220ENST00000620789 GJB3O75712 270 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 CCNB1P14635 433 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 PECAM1P16284 738 aaPredicted RBP18.49■□□□□ 0.55
LITAF-220ENST00000620789 CR2P20023 1033 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 SERPINA4P29622 427 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 PTPN7P35236 360 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 PPP2CBP62714 309 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 PPP2CAP67775 309 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 BBS12Q6ZW61 710 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 RABEPKQ7Z6M1 372 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 CEP76Q8TAP6 659 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 HCAR2Q8TDS4 363 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 UBE2Q2Q8WVN8 375 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 RAB7BQ96AH8 199 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 HES6Q96HZ4 224 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 ZNF641Q96N77 438 aaPredicted RBP18.49■□□□□ 0.55
LITAF-220ENST00000620789 NUDCD1Q96RS6 583 aa18.49■□□□□ 0.55
LITAF-220ENST00000620789 HEMGNQ9BXL5 484 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms