RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 NFKBIEO00221 500 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 MAGEB3O15480 346 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 MTSS1O43312 755 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 BEST1O76090 585 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 BMP10O95393 424 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 EPHX2P34913 555 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 TTLL4Q14679 1199 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 CYP2R1Q6VVX0 501 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 TRIM67Q6ZTA4 783 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 PIWIL4Q7Z3Z4 852 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 TRIM74Q86UV6 250 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 TRIM73Q86UV7 250 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 CNTN4Q8IWV2 1026 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 HSPBAP1Q96EW2 488 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 FTHL17Q9BXU8 183 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 NOL11Q9H8H0 719 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 FAM95CA0A1B0GW59 222 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 HNRNPLP14866 589 aaKnown RBP eCLIP19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 HOXA11P31270 313 aaPredicted RBP19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 CDH15P55291 814 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 GALNT2Q10471 571 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 CTBP1Q13363 440 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 VGLL4Q14135 290 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 FASTKQ14296 549 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 MAPRE2Q15555 327 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 Q3C1V9 767 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 AGKQ53H12 422 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 NHSL2Q5HYW2 709 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 NAPEPLDQ6IQ20 393 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 RIN3Q8TB24 985 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 FNDC8Q8TC99 324 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 TRPC4APQ8TEL6 797 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 SGF29Q96ES7 293 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 TEKT5Q96M29 485 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 DUSP16Q9BY84 665 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 WDR6Q9NNW5 1121 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 TNFRSF12AQ9NP84 129 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 SPAG4Q9NPE6 437 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 FIS1Q9Y3D6 152 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 ZNF236Q9UL36 1845 aa19.78■□□□□ 0.76
PDLIM3-212ENST00000620787 PSMD12O00232 456 aaPredicted RBP19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 CLDN5O00501 218 aa19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 PIRO00625 290 aa19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 FYNP06241 537 aa19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 STMN1P16949 149 aa19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 DNAJB13P59910 316 aa19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 SCAPQ12770 1279 aa19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 GADL1Q6ZQY3 521 aa19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 NTAN1Q96AB6 310 aa19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 SLC9A7Q96T83 725 aa19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 BRD8Q9H0E9 1235 aa19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 MEAF6Q9HAF1 191 aa19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 CLK4Q9HAZ1 481 aaKnown RBP19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 POLR2AP24928 1970 aaKnown RBP19.77■□□□□ 0.76
PDLIM3-212ENST00000620787 NEMP2A6NFY4 417 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 ZNF286BP0CG31 522 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 HCAR3P49019 387 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 C1QTNF8P60827 252 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 PPP1R3AQ16821 1122 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 UGP2Q16851 508 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 ALKAL1Q6UXT8 129 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 ANKFN1Q8N957 763 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 HEXDCQ8WVB3 486 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 DPF3Q92784 378 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 PPP1R14BQ96C90 147 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 MRPL57Q9BQC6 102 aaKnown RBP19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 CCDC167Q9P0B6 97 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 TMEM181Q9P2C4 612 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 SLC8A2Q9UPR5 921 aa19.77■□□□□ 0.75
PDLIM3-212ENST00000620787 SOCS2O14508 198 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 USP2O75604 605 aaPredicted RBP19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 CKMT2P17540 419 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 POLD2P49005 469 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 AIF1P55008 147 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 INTS6LQ5JSJ4 861 aaKnown RBP19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 PPP4R4Q6NUP7 873 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 C8orf82Q6P1X6 216 aaPredicted RBP19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 OSTM1Q86WC4 334 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 BBS5Q8N3I7 341 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 B3GALNT2Q8NCR0 500 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 PBXIP1Q96AQ6 731 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 VAT1Q99536 393 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 HNRNPABQ99729 332 aaKnown RBP19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 TXNRD2Q9NNW7 524 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 GDAP2Q9NXN4 497 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 COL1A2P08123 1366 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 UBDO15205 165 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 TIPRLO75663 272 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 SLC25A27O95847 323 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 JCHAINP01591 159 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 ATP5F1P24539 256 aaPredicted RBP19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 STT3AP46977 705 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 PKN3Q6P5Z2 889 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 ZBTB49Q6ZSB9 765 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 OTOP3Q7RTS5 596 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 LIMS2Q7Z4I7 341 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 SNX31Q8N9S9 440 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 FAM47BQ8NA70 645 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 FAM110BQ8TC76 370 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 TRPM4Q8TD43 1214 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms