RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 WDR60Q8WVS4 1066 aa9.31□□□□□ -0.92
RBFOX1-223ENST00000620507 PPP2R3CQ969Q6 453 aa9.31□□□□□ -0.92
RBFOX1-223ENST00000620507 FCRL3Q96P31 734 aaPredicted RBP9.31□□□□□ -0.92
RBFOX1-223ENST00000620507 FCRL5Q96RD9 977 aa9.31□□□□□ -0.92
RBFOX1-223ENST00000620507 DDX50Q9BQ39 737 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-223ENST00000620507 PAAF1Q9BRP4 392 aa9.31□□□□□ -0.92
RBFOX1-223ENST00000620507 VPS45Q9NRW7 570 aa9.31□□□□□ -0.92
RBFOX1-223ENST00000620507 SLC7A8Q9UHI5 535 aa9.31□□□□□ -0.92
RBFOX1-223ENST00000620507 RNF112Q9ULX5 631 aa9.31□□□□□ -0.92
RBFOX1-223ENST00000620507 AURKCQ9UQB9 309 aa9.31□□□□□ -0.92
RBFOX1-223ENST00000620507 TCAF1Q9Y4C2 921 aa9.31□□□□□ -0.92
RBFOX1-223ENST00000620507 RNF103-CHMP3A0A140T963 221 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 CBX4O00257 560 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 ME2P23368 584 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 PIK3R1P27986 724 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 ELAVL2Q12926 359 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 AGMOQ6ZNB7 445 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 RTL3Q8N8U3 475 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 MZB1Q8WU39 189 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 PTCD2Q8WV60 388 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 LENG8Q96PV6 779 aaPredicted RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 SGIP1Q9BQI5 828 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 SYTL2Q9HCH5 934 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 TRPC7Q9HCX4 862 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 MIOSQ9NXC5 875 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 POLR2AP24928 1970 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 ALDH1A2O94788 518 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 FGF3P11487 239 aaPredicted RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 PAX7P23759 505 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 GRK4P32298 578 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 CHRNA4P43681 627 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 NME5P56597 212 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 FASTKQ14296 549 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 ZNF460Q14592 562 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 RALGPS1Q5JS13 557 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 ZYG11AQ6WRX3 759 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 SLC24A5Q71RS6 500 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 HPS6Q86YV9 775 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 TRIML2Q8N7C3 387 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 RP9Q8TA86 221 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 BHMTQ93088 406 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 MIPEPQ99797 713 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 EGFL8Q99944 293 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 PTPN18Q99952 460 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 WDR41Q9HAD4 459 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 NDFIP2Q9NV92 336 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 CD274Q9NZQ7 290 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 KCNU1A8MYU2 1149 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 GABRDO14764 452 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 SOAT2O75908 522 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 CHRNGP07510 517 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 PIRTP0C851 137 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 ELNP15502 786 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 HK2P52789 917 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 TAS2R39P59534 338 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 RAD51Q06609 339 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 NIPAL4Q0D2K0 466 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 SCAPQ12770 1279 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 MSLNQ13421 630 aaPredicted RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 PEX6Q13608 980 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 HNRNPDQ14103 355 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 UPP1Q16831 310 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 EML3Q32P44 896 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 AAGABQ6PD74 315 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 DHDDSQ86SQ9 333 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 LCA5Q86VQ0 697 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 PLD6Q8N2A8 252 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 NPWQ8N729 165 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 CASP10Q92851 521 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 PTCD3Q96EY7 689 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 GPR63Q9BZJ6 419 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 SLC25A51Q9H1U9 297 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 AGO3Q9H9G7 860 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 GMIPQ9P107 970 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 VPS9D1Q9Y2B5 631 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 VWA7Q9Y334 891 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 WASF2Q9Y6W5 498 aa9.3□□□□□ -0.92
RBFOX1-223ENST00000620507 NCF1BA6NI72 391 aaPredicted RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 NCF1CA8MVU1 366 aaPredicted RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 PRRG1O14668 218 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 CASQ2O14958 399 aaPredicted RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 ALDH1A1P00352 501 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 RHOCP08134 193 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 NCF1P14598 390 aaPredicted RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 ALDH1A3P47895 512 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 MRPS22P82650 360 aaKnown RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 CDK18Q07002 472 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 TMEM135Q86UB9 458 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 ZC3HC1Q86WB0 502 aaKnown RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 UPF1Q92900 1129 aaKnown RBP eCLIP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 UTP4Q969X6 686 aaKnown RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 RCN3Q96D15 328 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 BTN2A3PQ96KV6 586 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 TRMT13Q9NUP7 481 aaKnown RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 FLRT1Q9NZU1 646 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 CDH22Q9UJ99 828 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 MCM3APO60318 1980 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 AKAP10O43572 662 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms