RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 CBLBQ13191 982 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 MPP3Q13368 585 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 HLTFQ14527 1009 aaKnown RBP eCLIP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 IHHQ14623 411 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 BRD3Q15059 726 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 SLC14A2Q15849 920 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 MYLK3Q32MK0 819 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 ACCSLQ4AC99 568 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 CARD16Q5EG05 197 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 TMEM196Q5HYL7 178 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 ANKRD22Q5VYY1 191 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 NCEH1Q6PIU2 408 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 TXNDC11Q6PKC3 985 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 KDELC1Q6UW63 502 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 SRLQ86TD4 932 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 SFTPA1Q8IWL2 248 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 PCDH20Q8N6Y1 951 aaKnown RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 SPATA22Q8NHS9 363 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 FBXO25Q8TCJ0 367 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 KCNV2Q8TDN2 545 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 FRS2Q8WU20 508 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 PRCCQ92733 491 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 MSANTD3Q96H12 275 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 MYO19Q96H55 970 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 NSMCE3Q96MG7 304 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 RBM15Q96T37 977 aaKnown RBP eCLIP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 MLPHQ9BV36 600 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 FRMD8Q9BZ67 464 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 FOXP3Q9BZS1 431 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 NOD2Q9HC29 1040 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 EIF2B3Q9NR50 452 aaKnown RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 HEBP1Q9NRV9 189 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 GOLGA6AQ9NYA3 693 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 THAP10Q9P2Z0 257 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 HCN2Q9UL51 889 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 DUSP12Q9UNI6 340 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 SLC8A2Q9UPR5 921 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 SHOC2Q9UQ13 582 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 TTLL3Q9Y4R7 772 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 PIAS3Q9Y6X2 628 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 XIRP2A4UGR9 3374 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 NUP205Q92621 2012 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 LOC285095A0A1B0GVY8 99 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 SHISA7A6NL88 538 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 TTC34A8MYJ7 566 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 K7EQS6 105 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 MAN2B1O00754 1011 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 NPC1O15118 1278 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 PMPCBO75439 489 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 TMEM63AO94886 807 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 POP4O95707 220 aaKnown RBP8.12□□□□□ -1.11
CPNE3-209ENST00000620393 GSRP00390 522 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 SERPINF2P08697 491 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 MLNP12872 115 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 HNRNPLP14866 589 aaKnown RBP eCLIP8.12□□□□□ -1.11
CPNE3-209ENST00000620393 DRD1P21728 446 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 ADRA1AP35348 466 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 CD86P42081 329 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 MAPK8P45983 427 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 WNT3AP56704 352 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 RAD51Q06609 339 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 GRSF1Q12849 480 aaKnown RBP eCLIP8.12□□□□□ -1.11
CPNE3-209ENST00000620393 SPARCL1Q14515 664 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 ZNF234Q14588 700 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 ATXN7L2Q5T6C5 722 aaPredicted RBP8.12□□□□□ -1.11
CPNE3-209ENST00000620393 EMC10Q5UCC4 262 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 FSTL4Q6MZW2 842 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 LRRC8BQ6P9F7 803 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 RANBP10Q6VN20 620 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 PPP1R21Q6ZMI0 780 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 LINC00523Q86TU6 105 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 CAND1Q86VP6 1230 aaKnown RBP8.12□□□□□ -1.11
CPNE3-209ENST00000620393 RNF135Q8IUD6 432 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 ZCCHC9Q8N567 271 aaKnown RBP8.12□□□□□ -1.11
CPNE3-209ENST00000620393 OR2AP1Q8NGE2 309 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 FAM3CQ92520 227 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 EZH1Q92800 747 aaPredicted RBP8.12□□□□□ -1.11
CPNE3-209ENST00000620393 EXOC2Q96KP1 924 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 MRGPRX2Q96LB1 330 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 ASB2Q96Q27 587 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 CPEB1Q9BZB8 566 aaKnown RBP8.12□□□□□ -1.11
CPNE3-209ENST00000620393 TSPYL1Q9H0U9 437 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 NEUROG2Q9H2A3 272 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 TNKS2Q9H2K2 1166 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 TMEM245Q9H330 911 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 LRRC40Q9H9A6 602 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 UBP1Q9NZI7 540 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 HECAQ9UBI9 543 aaPredicted RBP8.12□□□□□ -1.11
CPNE3-209ENST00000620393 WNT16Q9UBV4 365 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 MTRF1LQ9UGC7 380 aaKnown RBP8.12□□□□□ -1.11
CPNE3-209ENST00000620393 SUN2Q9UH99 717 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 SORCS3Q9UPU3 1222 aa8.12□□□□□ -1.11
CPNE3-209ENST00000620393 NUP210Q8TEM1 1887 aaPredicted RBP8.11□□□□□ -1.11
CPNE3-209ENST00000620393 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.11□□□□□ -1.11
CPNE3-209ENST00000620393 CCDC151A5D8V7 595 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 ANTXRLA6NF34 631 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 WASH3PC4AMC7 463 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 GOLGA8MH3BSY2 632 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 AP3B1O00203 1094 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms