RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ZNF669Q96BR6 464 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TASP1Q9H6P5 420 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 COG4Q9H9E3 785 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 RGS18Q9NS28 235 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PIH1D1Q9NWS0 290 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 COX16Q9P0S2 106 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 COPG2Q9UBF2 871 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 STK39Q9UEW8 545 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 OGDHLQ9ULD0 1010 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PAIP2BQ9ULR5 123 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 FIS1Q9Y3D6 152 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 AK5Q9Y6K8 562 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CASP8AP2Q9UKL3 1982 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 SF3B1O75533 1304 aaKnown RBP eCLIP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM159BA6NKW6 160 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 C9IYK1 514 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 BUD23O43709 281 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TOP3BO95985 862 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 CCDC166P0CW27 439 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 HSPA8P11142 646 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 ODC1P11926 461 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TPSB2P20231 275 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 MGAT1P26572 445 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TPP2P29144 1249 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PTK2BQ14289 1009 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TPSAB1Q15661 275 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PMF1Q6P1K2 205 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 KLHDC10Q6PID8 442 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 FRMD7Q6ZUT3 714 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PID1Q7Z2X4 250 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TRIM74Q86UV6 250 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TRIM73Q86UV7 250 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 RETREG3Q86VR2 466 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 TTC30AQ86WT1 665 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 C3orf58Q8NDZ4 430 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 PDCD6IPQ8WUM4 868 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 SEZ6LQ9BYH1 1024 aa7.08□□□□□ -1.28
SRGAP3-213ENST00000618999 RGSL1A5PLK6 1076 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 NBNO60934 754 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 PCSK1P29120 753 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 LBX1P52954 281 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 BCAT1P54687 386 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 C1QTNF8P60827 252 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 CCDC142Q17RM4 750 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 INSCQ1MX18 579 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 METTL21CQ5VZV1 264 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 MBLAC2Q68D91 279 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM117BQ6P1L5 589 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC39A5Q6ZMH5 540 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 STRA8Q7Z7C7 330 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 THEM5Q8N1Q8 247 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 COLGALT1Q8NBJ5 622 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 TSPAN14Q8NG11 270 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 ZNF670Q9BS34 389 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 SNRNP25Q9BV90 132 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 DRC3Q9H069 523 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 CDH19Q9H159 772 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 FAM124BQ9H5Z6 455 aaPredicted RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 ENPP3O14638 875 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 TRMUO75648 421 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 CRTAMO95727 393 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 APOA4P06727 396 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 PIK3R1P27986 724 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 SCN1AP35498 2009 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 NR2C2P49116 596 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 PRAMEP78395 509 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 BST2Q10589 180 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 MAPRE2Q15555 327 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 UPP1Q16831 310 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC44A4Q53GD3 710 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 SPOUT1Q5T280 376 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 STXBP5Q5T5C0 1151 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 GRTP1Q5TC63 336 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 DCLRE1AQ6PJP8 1040 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 CAND1Q86VP6 1230 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 ZNF280BQ86YH2 543 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 AHI1Q8N157 1196 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 CRYBG2Q8N1P7 616 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 ANKRD52Q8NB46 1076 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 DIS3LQ8TF46 1054 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 HTR3CQ8WXA8 447 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 NCSTNQ92542 709 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 AGAP3Q96P47 875 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 LENG8Q96PV6 779 aaPredicted RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 CPNE1Q99829 537 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 B3GNT5Q9BYG0 378 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 WDR41Q9HAD4 459 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 PCDH18Q9HCL0 1135 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 PLK2Q9NYY3 685 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 GTSE1Q9NYZ3 720 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 ZIM2Q9NZV7 527 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 TRIP11Q15643 1979 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 A0A096LPK6 155 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 GIPC1O14908 333 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 WARSP23381 471 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 SCNN1BP51168 640 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 GALK1P51570 392 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 ARPP19P56211 112 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 MAP3K7CLP57077 242 aa7.07□□□□□ -1.28
SRGAP3-213ENST00000618999 HPCAP84074 193 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms