RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 EBF3Q9H4W6 596 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 NT5MQ9NPB1 228 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 ENTPD7Q9NQZ7 604 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 SCOCQ9UIL1 159 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 MID2Q9UJV3 735 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 RGSL1A5PLK6 1076 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 B4GALT3O60512 393 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 KPNA6O60684 536 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 ZNF623O75123 536 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 ASGR1P07306 291 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 GRK4P32298 578 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 SLC12A2P55011 1212 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 PRKAA1Q13131 559 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 UGP2Q16851 508 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 NEPROQ6NW34 567 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 AAGABQ6PD74 315 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 POTEHQ6S545 545 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 RANBP10Q6VN20 620 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 ACAD11Q709F0 780 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 RDH11Q8TC12 318 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 GATA6Q92908 595 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 USP13Q92995 863 aaPredicted RBP11.33□□□□□ -0.6
TP53-223ENST00000618944 PABPC5Q96DU9 382 aaKnown RBP11.33□□□□□ -0.6
TP53-223ENST00000618944 CDRT15Q96T59 188 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 VCXQ9H320 206 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 TRMT13Q9NUP7 481 aaKnown RBP11.33□□□□□ -0.6
TP53-223ENST00000618944 FBXO5Q9UKT4 447 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 DSEQ9UL01 958 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 GABRQQ9UN88 632 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 CDYLQ9Y232 598 aa11.33□□□□□ -0.6
TP53-223ENST00000618944 FGF10O15520 208 aaPredicted RBP11.32□□□□□ -0.6
TP53-223ENST00000618944 RAG1P15918 1043 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 CRABP2P29373 138 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 CD86P42081 329 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 CD151P48509 253 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 PLK1P53350 603 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 MLLT6P55198 1093 aaPredicted RBP11.32□□□□□ -0.6
TP53-223ENST00000618944 PKNOX1P55347 436 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 BTKQ06187 659 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 ZNF33AQ06730 810 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 CYLC2Q14093 348 aaPredicted RBP11.32□□□□□ -0.6
TP53-223ENST00000618944 LBRQ14739 615 aaKnown RBP11.32□□□□□ -0.6
TP53-223ENST00000618944 MAPRE1Q15691 268 aaKnown RBP11.32□□□□□ -0.6
TP53-223ENST00000618944 KCNA10Q16322 511 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 SFT2D3Q587I9 215 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 SH2D4BQ5SQS7 431 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 PIK3R6Q5UE93 754 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 MANEALQ5VSG8 457 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 PTAR1Q7Z6K3 402 aaPredicted RBP11.32□□□□□ -0.6
TP53-223ENST00000618944 RASAL3Q86YV0 1011 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 DSELQ8IZU8 1212 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 LZTR1Q8N653 840 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 RTL3Q8N8U3 475 aaKnown RBP11.32□□□□□ -0.6
TP53-223ENST00000618944 TXNDC5Q8NBS9 432 aaKnown RBP11.32□□□□□ -0.6
TP53-223ENST00000618944 GDPD5Q8WTR4 605 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 SOCS4Q8WXH5 440 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 TRIB2Q92519 343 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 RCN3Q96D15 328 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 SMOC2Q9H3U7 446 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 NOL6Q9H6R4 1146 aaKnown RBP11.32□□□□□ -0.6
TP53-223ENST00000618944 SPC25Q9HBM1 224 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 DNAJB4Q9UDY4 337 aa11.32□□□□□ -0.6
TP53-223ENST00000618944 MAGEA13PA6NCF6 341 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 KCNU1A8MYU2 1149 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 STX16-NPEPL1H3BU86 382 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 CNTN5O94779 1100 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 IGHA2P01877 340 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 HAPLN1P10915 354 aaPredicted RBP11.31□□□□□ -0.6
TP53-223ENST00000618944 ENO3P13929 434 aaPredicted RBP11.31□□□□□ -0.6
TP53-223ENST00000618944 PAMP19021 973 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 DNAJB2P25686 324 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 PEX2P28328 305 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 PRDX6P30041 224 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 ETFBP38117 255 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 MTTPP55157 894 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 SLC10A7Q0GE19 358 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 GRIK3Q13003 919 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 OR52E8Q6IFG1 317 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 TRIM67Q6ZTA4 783 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 SDCCAG8Q86SQ7 713 aaPredicted RBP11.31□□□□□ -0.6
TP53-223ENST00000618944 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 CNTN4Q8IWV2 1026 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 KLHDC8BQ8IXV7 354 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 KYQ8NBH2 561 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 C2CD4AQ8NCU7 369 aaPredicted RBP11.31□□□□□ -0.6
TP53-223ENST00000618944 HMCESQ96FZ2 354 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 SUSD3Q96L08 255 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 OLFM1Q99784 485 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 TRIM62Q9BVG3 475 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 UBE2OQ9C0C9 1292 aaKnown RBP11.31□□□□□ -0.6
TP53-223ENST00000618944 POMKQ9H5K3 350 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 TREX1Q9NSU2 369 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 GTSE1Q9NYZ3 720 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 NOD1Q9Y239 953 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 TTC3P53804 2025 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 GJB3O75712 270 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 SOAT2O75908 522 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 HMBSP08397 361 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 COL6A2P12110 1019 aa11.31□□□□□ -0.6
TP53-223ENST00000618944 KCNA5P22460 613 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms