RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 IPPQ9Y573 584 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 GMPPBQ9Y5P6 360 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 DMRT1Q9Y5R6 373 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 ADAMTS12P58397 1594 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 DCCP43146 1447 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 ZMYM2Q9UBW7 1377 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 A0A087WXM4 84 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 SSU72P8A0A1W2PR75 194 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 TTC26A0AVF1 554 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 LINC00862A6NCI5 91 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 ZNF503-AS2A6NEH8 195 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 ARGFXA6NJG6 315 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 PCP4L1A6NKN8 68 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 A6NL46 340 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 C12orf71A8MTZ7 269 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 A8MVJ9 347 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 F8W036 122 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 H3BMM5 538 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 RBAK-RBAKDNI3L0D1 243 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 PGRMC1O00264 195 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 EEF2KO00418 725 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 RTCAO00442 366 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 PODXLO00592 558 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 PPM1DO15297 605 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 POLR2DO15514 142 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 PRPF4O43172 522 aaKnown RBP eCLIP3.55□□□□□ -1.84
SMC5-204ENST00000618375 ZBTB43O43298 467 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 SPOPO43791 374 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 GREM1O60565 184 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 CCNT2O60583 730 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 DNAJA2O60884 412 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 CLPXO76031 633 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 CIAO1O76071 339 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 CAMTA2O94983 1202 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 PIGNO95427 931 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 CBX6O95503 412 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 CALB1P05937 261 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 LTA4HP09960 611 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 ZNF865P0CJ78 1059 aaPredicted RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 SRGAP2BP0DMP2 458 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 CKBP12277 381 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 POU2F1P14859 743 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 PDGFRAP16234 1089 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 STMN1P16949 149 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 HOXB8P17481 243 aaPredicted RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 RAB3AP20336 220 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 CHMP24386 653 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 CTNNA2P26232 953 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 RBL1P28749 1068 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 SOX5P35711 763 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 UGT2B10P36537 528 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 HPCAL1P37235 193 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 GDNFP39905 211 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 ARL1P40616 181 aaPredicted RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 BTDP43251 543 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 MTIF2P46199 727 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 LEPRP48357 1165 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 MASP1P48740 699 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 CDK8P49336 464 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 CLCN4P51793 760 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 BMXP51813 675 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 HK2P52789 917 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 MAPK12P53778 367 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 AIF1P55008 147 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 PSMD4P55036 377 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 DCDC1P59894 354 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 RAB4BP61018 213 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 TSPAN5P62079 268 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 UBE2IP63279 158 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 CSNK2BP67870 215 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 EEF1A1P68104 462 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 TXNL4AP83876 142 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 UBE3AQ05086 875 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 EEF1A2Q05639 463 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 TEFQ10587 303 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 BST2Q10589 180 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 KRR1Q13601 381 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 AUHQ13825 339 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 FRG1Q14331 258 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 FASTKD3Q14CZ7 662 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 MORF4L2Q15014 288 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 NCF4Q15080 339 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 PTPAQ15257 358 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 LTB4RQ15722 352 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 PDK4Q16654 411 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 UGP2Q16851 508 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 GEN1Q17RS7 908 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 TWISTNBQ3B726 338 aaPredicted RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 SLC9C1Q4G0N8 1177 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 AASDHQ4L235 1098 aaPredicted RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 TAF1BQ53T94 588 aaPredicted RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 YIF1BQ5BJH7 314 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 ZMAT1Q5H9K5 638 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 TEX30Q5JUR7 227 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 RARS2Q5T160 578 aaKnown RBP3.55□□□□□ -1.84
SMC5-204ENST00000618375 ZNF618Q5T7W0 954 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 MEI1Q5TIA1 1274 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 PIK3R6Q5UE93 754 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 EEF1A1P5Q5VTE0 462 aa3.55□□□□□ -1.84
SMC5-204ENST00000618375 GARNL3Q5VVW2 1013 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms