RNA–Protein interactions for RNA: ENST00000617847.4

DDB2-213, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-213ENST00000617847 TBC1D3KA0A087X1G2 549 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 A0A0U1RQJ8 604 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 GRID2IPA4D2P6 1211 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 TBC1D3FA6NER0 549 aaPredicted RBP12.62□□□□□ -0.39
DDB2-213ENST00000617847 GOLGA6L3A6NEY3 463 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 TBC1D3LB9A6J9 549 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 BCAT2O15382 392 aaPredicted RBP12.62□□□□□ -0.39
DDB2-213ENST00000617847 ARHGAP6O43182 974 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 AP1G1O43747 822 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 GDF9O60383 454 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 UGT2B4P06133 528 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 TBC1D3HP0C7X1 549 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 ADRB3P13945 408 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 CR2P20023 1033 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 CDKN2BP42772 138 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 RENBPP51606 427 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 AASDHQ4L235 1098 aaPredicted RBP12.62□□□□□ -0.39
DDB2-213ENST00000617847 TBC1D3GQ6DHY5 549 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 TBC1D3CQ6IPX1 549 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 NEK5Q6P3R8 708 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 MFSD7Q6UXD7 560 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 GDPD4Q6W3E5 623 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 DAAM2Q86T65 1068 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 KATNAL2Q8IYT4 538 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 TBC1D3Q8IZP1 549 aaPredicted RBP12.62□□□□□ -0.39
DDB2-213ENST00000617847 ZCCHC9Q8N567 271 aaKnown RBP12.62□□□□□ -0.39
DDB2-213ENST00000617847 TEX26Q8N6G2 289 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 LRRC57Q8N9N7 239 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 CCDC112Q8NEF3 446 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 SNX19Q92543 992 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 MAML1Q92585 1016 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
DDB2-213ENST00000617847 HDAC11Q96DB2 347 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 KLHL32Q96NJ5 620 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 TUBGCP5Q96RT8 1024 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 NUSAP1Q9BXS6 441 aaKnown RBP12.62□□□□□ -0.39
DDB2-213ENST00000617847 DTLQ9NZJ0 730 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 FADS3Q9Y5Q0 445 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 ADGRG1Q9Y653 693 aa12.62□□□□□ -0.39
DDB2-213ENST00000617847 PLXNA2O75051 1894 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 ADAMTS9Q9P2N4 1935 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 DMXL1Q9Y485 3027 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 TSPAN11A1L157 253 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 C16orf96A6NNT2 1141 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 CFIP05156 583 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 TNNT1P13805 278 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 ZFXP17010 805 aaPredicted RBP12.61□□□□□ -0.39
DDB2-213ENST00000617847 MX2P20592 715 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 CCNCP24863 283 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 CTNNA1P35221 906 aaKnown RBP12.61□□□□□ -0.39
DDB2-213ENST00000617847 HSPA9P38646 679 aaKnown RBP12.61□□□□□ -0.39
DDB2-213ENST00000617847 ABL2P42684 1182 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 MARCKSL1P49006 195 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 KIF5AQ12840 1032 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 HNRNPDQ14103 355 aaKnown RBP12.61□□□□□ -0.39
DDB2-213ENST00000617847 IFI16Q16666 785 aaKnown RBP12.61□□□□□ -0.39
DDB2-213ENST00000617847 SRLQ86TD4 932 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 LRRC8AQ8IWT6 810 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 PGBD5Q8N414 524 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 NETO1Q8TDF5 533 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 HCAR2Q8TDS4 363 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 KRT35Q92764 455 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 RAB7BQ96AH8 199 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 ZNF641Q96N77 438 aaPredicted RBP12.61□□□□□ -0.39
DDB2-213ENST00000617847 MGME1Q9BQP7 344 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 EDEM2Q9BV94 578 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 MIR1-1HGQ9H1L0 117 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 TRIM10Q9UDY6 481 aa12.61□□□□□ -0.39
DDB2-213ENST00000617847 ASCC3Q8N3C0 2202 aaKnown RBP12.61□□□□□ -0.39
DDB2-213ENST00000617847 LAMA1P25391 3075 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 CABIN1Q9Y6J0 2220 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.6□□□□□ -0.39
DDB2-213ENST00000617847 CDX4O14627 284 aaPredicted RBP12.6□□□□□ -0.39
DDB2-213ENST00000617847 APOL1O14791 398 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 AREL1O15033 823 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 SPINT1O43278 529 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 MAP3K6O95382 1288 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 PIGNO95427 931 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 CTNNA2P26232 953 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 NUDT1P36639 197 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 NAP1L1P55209 391 aaKnown RBP12.6□□□□□ -0.39
DDB2-213ENST00000617847 TIGD7Q6NT04 549 aaPredicted RBP12.6□□□□□ -0.39
DDB2-213ENST00000617847 FBXL19Q6PCT2 694 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 SPOCD1Q6ZMY3 1216 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 RCOR2Q8IZ40 523 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 EXD1Q8NHP7 514 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 KIAA1524Q8TCG1 905 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.6□□□□□ -0.39
DDB2-213ENST00000617847 NSMCE1Q8WV22 266 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 NSMCE3Q96MG7 304 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 MAK16Q9BXY0 300 aaKnown RBP12.6□□□□□ -0.39
DDB2-213ENST00000617847 SUV39H2Q9H5I1 410 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 TM9SF3Q9HD45 589 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 DLL3Q9NYJ7 618 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 ZFR2Q9UPR6 939 aaKnown RBP12.6□□□□□ -0.39
DDB2-213ENST00000617847 DMTF1Q9Y222 760 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.6□□□□□ -0.39
DDB2-213ENST00000617847 PCDHA3Q9Y5H8 950 aa12.6□□□□□ -0.39
DDB2-213ENST00000617847 ARHGAP33O14559 1287 aa12.59□□□□□ -0.39
DDB2-213ENST00000617847 SLC30A4O14863 429 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms