RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 POMKQ9H5K3 350 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 GLOD4Q9HC38 313 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 RRN3Q9NYV6 651 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 TBC1D30Q9Y2I9 924 aa11.93□□□□□ -0.5
C11orf54-215ENST00000617482 TCAF2A6NFQ2 919 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 MAFKO60675 156 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 COL6A2P12110 1019 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 CCNCP24863 283 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 PRKAA2P54646 552 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 CSHL1Q14406 222 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 PCSK7Q16549 785 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 TIGD5Q53EQ6 642 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 RARS2Q5T160 578 aaKnown RBP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 GK5Q6ZS86 529 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 TRIM67Q6ZTA4 783 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 SPATA24Q86W54 205 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 ARHGAP12Q8IWW6 846 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 TMEM86AQ8N2M4 240 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 PCDH20Q8N6Y1 951 aaKnown RBP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 PPHLN1Q8NEY8 458 aaKnown RBP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 CNBD2Q96M20 576 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 PKP2Q99959 881 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 FSD1LQ9BXM9 530 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 SLC39A8Q9C0K1 460 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 MRPL46Q9H2W6 279 aaKnown RBP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 CLIC5Q9NZA1 410 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 ADA2Q9NZK5 511 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 NCKIPSDQ9NZQ3 722 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 SFMBT1Q9UHJ3 866 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 NUDT5Q9UKK9 219 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 CDH9Q9ULB4 789 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 AK5Q9Y6K8 562 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 A0A1B0GVG6 124 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 C17orf102A2RUQ5 167 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 KCNU1A8MYU2 1149 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 PSMD3O43242 534 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 MSI1O43347 362 aaKnown RBP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 CACNG3O60359 315 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 ANXA9O76027 345 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 CRTAMO95727 393 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 PABPC4LP0CB38 370 aaKnown RBP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 PIM1P11309 404 aaPredicted RBP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 SCNN1GP51170 649 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 HK2P52789 917 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 PLK1P53350 603 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 SLC12A2P55011 1212 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 ADGRE1Q14246 886 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 ZNF789Q5FWF6 425 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 RBM20Q5T481 1227 aaKnown RBP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 CNSTQ6PJW8 725 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 USP50Q70EL3 339 aaPredicted RBP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 SETD3Q86TU7 594 aaPredicted RBP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 CNTN4Q8IWV2 1026 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 SNX31Q8N9S9 440 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 HASPINQ8TF76 798 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 KLHL32Q96NJ5 620 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 TSGA13Q96PP4 275 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 FCRL5Q96RD9 977 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 RBM22Q9NW64 420 aaKnown RBP eCLIP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 FLRT1Q9NZU1 646 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 RIMS3Q9UJD0 308 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 TCAF1Q9Y4C2 921 aa11.92□□□□□ -0.5
C11orf54-215ENST00000617482 TRIP12Q14669 1992 aaPredicted RBP11.92□□□□□ -0.5
C11orf54-215ENST00000617482 SDHDO14521 159 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 FAM163BP0C2L3 166 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 HDCP19113 662 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 KCNA5P22460 613 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 CD151P48509 253 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 PGFP49763 221 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 INHBEP58166 350 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 C6orf52Q5T4I8 152 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 PTAR1Q7Z6K3 402 aaPredicted RBP11.91□□□□□ -0.5
C11orf54-215ENST00000617482 RTP3Q9BQQ7 232 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 UBE2OQ9C0C9 1292 aaKnown RBP11.91□□□□□ -0.5
C11orf54-215ENST00000617482 OSBPL2Q9H1P3 480 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 TNFRSF12AQ9NP84 129 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 DMAP1Q9NPF5 467 aaPredicted RBP11.91□□□□□ -0.5
C11orf54-215ENST00000617482 FAM105AQ9NUU6 356 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 SLC38A7Q9NVC3 462 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 TMLHEQ9NVH6 421 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 VPS28Q9UK41 221 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 FBXO5Q9UKT4 447 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 ST3GAL5Q9UNP4 418 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 NEU3Q9UQ49 428 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 PTCH2Q9Y6C5 1203 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 TLL2Q9Y6L7 1015 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 MYOCOSA0A1B0GUC4 107 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 ARL5CA6NH57 179 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 UNCXA6NJT0 531 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 HAS3O00219 553 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 SLC22A2O15244 555 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 DENRO43583 198 aaKnown RBP11.91□□□□□ -0.5
C11orf54-215ENST00000617482 PAGE1O75459 146 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 TADA2AO75478 443 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 MOCS2O96007 188 aaPredicted RBP11.91□□□□□ -0.5
C11orf54-215ENST00000617482 HLA-DQB2P05538 268 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 CTSHP09668 335 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 DNAJB2P25686 324 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 PTK2BQ14289 1009 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 PPP1R3AQ16821 1122 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms