RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 EME2A4GXA9 379 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 AKT2P31751 481 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 PDX1P52945 283 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 DAOAP59103 153 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 HNRNPKP61978 463 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 ZNF284Q2VY69 593 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 DCAF6Q58WW2 860 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 TRIM72Q6ZMU5 477 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 GCNT7Q6ZNI0 430 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 ZNF548Q8NEK5 533 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 TPCN2Q8NHX9 752 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 OR8D1Q8WZ84 308 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 NAPGQ99747 312 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 PPM1HQ9ULR3 514 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 AHCTF1Q8WYP5 2266 aa17.96■□□□□ 0.47
TRAPPC3-209ENST00000616395 A0A087X0T9 212 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 BTNL10A8MVZ5 291 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 PIK3R2O00459 728 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 TCEA3O75764 348 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 FAM228BP0C875 321 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 VDRP11473 427 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 LCP1P13796 627 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 HNRNPA2B1P22626 353 aaKnown RBP17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 SLC5A2P31639 672 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 C4orf17Q53FE4 359 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 PERM1Q5SV97 790 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 Q6ZSR6 202 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 ABI3BPQ7Z7G0 1075 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 TRIM11Q96F44 468 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 FCRL2Q96LA5 508 aaPredicted RBP17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 CNGB3Q9NQW8 809 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 NCKIPSDQ9NZQ3 722 aa17.96■□□□□ 0.46
TRAPPC3-209ENST00000616395 TDRD6O60522 2096 aaKnown RBP17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 C1QTNF3-AMACRE9PGA6 284 aa17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 M0QYV0 167 aa17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 PPFIA2O75334 1257 aa17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 URI1O94763 535 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 PAEPP09466 180 aa17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 PNMA6AP0CW24 399 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 RGS7P49802 495 aa17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 BST2Q10589 180 aaKnown RBP17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 TBR1Q16650 682 aa17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 PIP5KL1Q5T9C9 394 aa17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 OR6B2Q6IFH4 312 aa17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 HESX1Q9UBX0 185 aa17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 REXO2Q9Y3B8 237 aaKnown RBP17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 RELNP78509 3460 aa17.95■□□□□ 0.46
TRAPPC3-209ENST00000616395 TLN1Q9Y490 2541 aaKnown RBP17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 MYO9AB2RTY4 2548 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 MUSKO15146 869 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 GABBR2O75899 941 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 GZMAP12544 262 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 ARHGAP25P42331 645 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 TUBB4BP68371 445 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 CDR2Q01850 454 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 SERINC3Q13530 473 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 FZD2Q14332 565 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 NR0B2Q15466 257 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 DEFB133Q30KQ1 61 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 ACCSLQ4AC99 568 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 C14orf80Q86SX3 495 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 HORMAD1Q86X24 394 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 JAMLQ86YT9 394 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 SYCE1Q8N0S2 351 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 LGI2Q8N0V4 545 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 SCML4Q8N228 414 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 KCTD13Q8WZ19 329 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 SLC25A18Q9H1K4 315 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 XPO7Q9UIA9 1087 aaKnown RBP17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 SALL4Q9UJQ4 1053 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 MAN2B2Q9Y2E5 1009 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 PCDHGA7Q9Y5G6 932 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 CSNK1G3Q9Y6M4 447 aa17.94■□□□□ 0.46
TRAPPC3-209ENST00000616395 LRRK2Q5S007 2527 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 A0A0A6YYK5 440 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 MACROD2A1Z1Q3 448 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 CLEC18AA5D8T8 446 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 PLD2O14939 933 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 MCF2LO15068 1137 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 MED7O43513 233 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 MOCS2O96007 188 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 CSF2P04141 144 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 CYP11B1P15538 503 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 PDGFRAP16234 1089 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 NEK5Q6P3R8 708 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 LCLAT1Q6UWP7 414 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 CLEC18BQ6UXF7 455 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 Q6ZVU0 165 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 PTAR1Q7Z6K3 402 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 RHOT2Q8IXI1 618 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 SLC35F6Q8N357 371 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 CLEC18CQ8NCF0 446 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 BMFQ96LC9 184 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 SYNDIG1Q9H7V2 258 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 KLF15Q9UIH9 416 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 PCDHGA4Q9Y5G9 962 aa17.93■□□□□ 0.46
TRAPPC3-209ENST00000616395 UTP20O75691 2785 aaKnown RBP17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 ANKRD62A6NC57 917 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 A6NNZ2 444 aa17.92■□□□□ 0.46
TRAPPC3-209ENST00000616395 AQP9O43315 295 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms