RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 NEMP2A6NFY4 417 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 RRP8O43159 456 aaKnown RBP19.26■□□□□ 0.67
CDX1-202ENST00000616154 CD160O95971 181 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 DNA2P51530 1060 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 ZNF75DP51815 510 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 MAPK8IP2Q13387 824 aaPredicted RBP19.26■□□□□ 0.67
CDX1-202ENST00000616154 ARL13BQ3SXY8 428 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 RAB6CQ53S08 254 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 CDCP2Q5VXM1 449 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 E4F1Q66K89 784 aaPredicted RBP19.26■□□□□ 0.67
CDX1-202ENST00000616154 WDR59Q6PJI9 974 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 PARS2Q7L3T8 475 aaKnown RBP19.26■□□□□ 0.67
CDX1-202ENST00000616154 TMC6Q7Z403 805 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 MCOLN2Q8IZK6 566 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 FGF11Q92914 225 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 UBL7Q96S82 380 aaPredicted RBP19.26■□□□□ 0.67
CDX1-202ENST00000616154 SELENOOQ9BVL4 669 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 RAB6CQ9H0N0 254 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 PRORYQ9H606 182 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 CAAP1Q9H8G2 361 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 USP29Q9HBJ7 922 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 OR12D3Q9UGF7 316 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 NEU3Q9UQ49 428 aa19.26■□□□□ 0.67
CDX1-202ENST00000616154 POM121BA6NF01 834 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 SCAMP1O15126 338 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 GJB6O95452 261 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 PAK4O96013 591 aaPredicted RBP19.25■□□□□ 0.67
CDX1-202ENST00000616154 TPM3P06753 285 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 GP1BAP07359 652 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 GPD1P21695 349 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 ACTN2P35609 894 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 ACVRL1P37023 503 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 MAPKAPK2P49137 400 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 ZNF143P52747 638 aaPredicted RBP19.25■□□□□ 0.67
CDX1-202ENST00000616154 HNRNPKP61978 463 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDX1-202ENST00000616154 FZD2Q14332 565 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 KDM7AQ6ZMT4 941 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 NLRP14Q86W24 1093 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 FAM181AQ8N9Y4 354 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 RAB7BQ96AH8 199 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 APOLD1Q96LR9 279 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 DUSP23Q9BVJ7 150 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 TRIM5Q9C035 493 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 ZDHHC6Q9H6R6 413 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 NDFIP2Q9NV92 336 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 DNAJC28Q9NX36 388 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 ACTL7AQ9Y615 435 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 LY6G6EA0A0G2JKS1 128 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 SPTY2D1-AS1A0A0U1RR47 76 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 A0A1W2PQJ5 194 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 EIF4E1BA6NMX2 242 aaKnown RBP19.25■□□□□ 0.67
CDX1-202ENST00000616154 RAD51BO15315 384 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 OPA1O60313 960 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 CSF2P04141 144 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 GZMAP12544 262 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 NME1P15531 152 aaKnown RBP19.25■□□□□ 0.67
CDX1-202ENST00000616154 RHOQP17081 205 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 RABIFP47224 123 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 GEMIN4P57678 1058 aaKnown RBP19.25■□□□□ 0.67
CDX1-202ENST00000616154 TBC1D25Q3MII6 688 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 ZNF542PQ5EBM4 170 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 DNAJC24Q6P3W2 148 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 PHLDB2Q86SQ0 1253 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 PARGQ86W56 976 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 FAM172AQ8WUF8 416 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 ARHGEF2Q92974 986 aaKnown RBP19.25■□□□□ 0.67
CDX1-202ENST00000616154 LENG8Q96PV6 779 aaPredicted RBP19.25■□□□□ 0.67
CDX1-202ENST00000616154 KLF6Q99612 283 aaPredicted RBP19.25■□□□□ 0.67
CDX1-202ENST00000616154 C1QTNF2Q9BXJ5 285 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 TM6SF2Q9BZW4 377 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 SEPT11Q9NVA2 429 aaKnown RBP19.25■□□□□ 0.67
CDX1-202ENST00000616154 EVA1BQ9NVM1 165 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 TMEM248Q9NWD8 314 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 TAS2R14Q9NYV8 317 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 PCDHB1Q9Y5F3 818 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 U3KQA8 63 aa19.25■□□□□ 0.67
CDX1-202ENST00000616154 H3BM21 787 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 K7ESM1 405 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 TSPAN6O43657 245 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 GSRP00390 522 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 CDC25BP30305 580 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 ABL2P42684 1182 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 ASIC2Q16515 512 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 CDO1Q16878 200 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 ZNF805Q5CZA5 627 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 PLEKHA7Q6IQ23 1121 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 RWDD4Q6NW29 188 aaKnown RBP19.24■□□□□ 0.67
CDX1-202ENST00000616154 ZNF571Q7Z3V5 609 aaPredicted RBP19.24■□□□□ 0.67
CDX1-202ENST00000616154 DENND6BQ8NEG7 585 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 ZNF548Q8NEK5 533 aaPredicted RBP19.24■□□□□ 0.67
CDX1-202ENST00000616154 ASB12Q8WXK4 309 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 CNPY3Q9BT09 278 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 MAGEH1Q9H213 219 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 HAUS4Q9H6D7 363 aa19.24■□□□□ 0.67
CDX1-202ENST00000616154 COL27A1Q8IZC6 1860 aaPredicted RBP19.23■□□□□ 0.67
CDX1-202ENST00000616154 C16orf96A6NNT2 1141 aa19.23■□□□□ 0.67
CDX1-202ENST00000616154 FAM72CH0Y354 149 aa19.23■□□□□ 0.67
CDX1-202ENST00000616154 FPGTO14772 594 aa19.23■□□□□ 0.67
CDX1-202ENST00000616154 CCP110O43303 1012 aa19.23■□□□□ 0.67
CDX1-202ENST00000616154 TNFAIP3P21580 790 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms