RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 SNTG2Q9NY99 539 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 C15orf38-AP3S2A0A0A6YYH1 394 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 TNFRSF10BO14763 440 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 GLRA3O75311 464 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 OTUD3Q5T2D3 398 aaPredicted RBP12.75□□□□□ -0.37
TCF4-248ENST00000616053 DUPD1Q68J44 220 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 C9orf72Q96LT7 481 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 ASB8Q9H765 288 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 IRS2Q9Y4H2 1338 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 ASGR1P07306 291 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 USP17L7P0C7H9 530 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 TCF4P15884 667 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 ZNF823P16415 610 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 CCNA2P20248 432 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 ACAP1Q15027 740 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 IL27RAQ6UWB1 636 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 MPZL3Q6UWV2 235 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 MTMR12Q9C0I1 747 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 PPCSQ9HAB8 311 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 CLDND1Q9NY35 253 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 DEC1Q9P2X7 70 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 ENTPD3O75355 529 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 RPL3P39023 403 aaKnown RBP12.75□□□□□ -0.37
TCF4-248ENST00000616053 GMFBP60983 142 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 DSG1Q02413 1049 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 BNIP3Q12983 259 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 RIPOR1Q6ZS17 1223 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 C12orf66Q96MD2 445 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 NSMCE2Q96MF7 247 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 TMBIM4Q9HC24 238 aa12.75□□□□□ -0.37
TCF4-248ENST00000616053 MRPL42Q9Y6G3 142 aaKnown RBP12.75□□□□□ -0.37
TCF4-248ENST00000616053 EPHX1P07099 455 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 VDRP11473 427 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 LIFRP42702 1097 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 SMIM11AP58511 58 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 TERB1Q8NA31 727 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 MYLPFQ96A32 169 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 MARCH2Q9P0N8 246 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 PNMA8CA0A1B0GUJ8 204 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 TTC26A0AVF1 554 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 LGALS16A8MUM7 142 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 SRCP12931 536 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 PRCPP42785 496 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 VLDLRP98155 873 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 MAPRE3Q9UPY8 281 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 MT-CO1P00395 513 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 THRAP10827 490 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 KCNA3P22001 575 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 TSPAN5P62079 268 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 PLEKHA7Q6IQ23 1121 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 HFE2Q6ZVN8 426 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 GALNT13Q8IUC8 556 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 PTCD2Q8WV60 388 aaKnown RBP12.74□□□□□ -0.37
TCF4-248ENST00000616053 RBM18Q96H35 190 aaKnown RBP12.74□□□□□ -0.37
TCF4-248ENST00000616053 MXRA8Q9BRK3 442 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 VANGL2Q9ULK5 521 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 ACOT9Q9Y305 439 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 OVOS2A0A0G2JMS6 1433 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 OVOS2A0A0J9YW53 1432 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 OVOS2Q6IE36 1432 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 SAGP10523 405 aaPredicted RBP12.74□□□□□ -0.37
TCF4-248ENST00000616053 PRMT9Q6P2P2 845 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 SLC35G2Q8TBE7 412 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 WBP11Q9Y2W2 641 aaKnown RBP12.74□□□□□ -0.37
TCF4-248ENST00000616053 A8MUI8 341 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 SLC16A3O15427 465 aaKnown RBP12.74□□□□□ -0.37
TCF4-248ENST00000616053 HCN1O60741 890 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 C6P13671 934 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 TLR1Q15399 786 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 BICRALQ6AI39 1079 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 ADGRG6Q86SQ4 1221 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 DENND1CQ8IV53 801 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 PCDH12Q9NPG4 1184 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 L7N2F9 121 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 PDXKO00764 312 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 NFATC1O95644 943 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 SPATA31D3P0C874 917 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 VAMP2P63027 116 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 OTUD4Q01804 1114 aaKnown RBP12.74□□□□□ -0.37
TCF4-248ENST00000616053 AGKQ53H12 422 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 SPATA31D4Q6ZUB0 917 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 TMEM151BQ8IW70 566 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 SPATA20Q8TB22 786 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 HGH1Q9BTY7 390 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 FRMD8P1Q9BZ68 369 aaPredicted RBP12.74□□□□□ -0.37
TCF4-248ENST00000616053 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
TCF4-248ENST00000616053 SERINC1Q9NRX5 453 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 TRMT13Q9NUP7 481 aaKnown RBP12.74□□□□□ -0.37
TCF4-248ENST00000616053 CLN6Q9NWW5 311 aa12.74□□□□□ -0.37
TCF4-248ENST00000616053 PIM1P11309 404 aaPredicted RBP12.73□□□□□ -0.37
TCF4-248ENST00000616053 ZNF16P17020 682 aaPredicted RBP12.73□□□□□ -0.37
TCF4-248ENST00000616053 CDH5P33151 784 aaPredicted RBP12.73□□□□□ -0.37
TCF4-248ENST00000616053 PSME3P61289 254 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 XKR6Q5GH73 641 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 CCNJLQ8IV13 435 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 HID1Q8IV36 788 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 COQ8AQ8NI60 647 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 MID1IP1Q9NPA3 183 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 MED31Q9Y3C7 131 aa12.73□□□□□ -0.37
TCF4-248ENST00000616053 CPSF1Q10570 1443 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms