RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 KAT2AQ92830 837 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 MCRS1Q96EZ8 462 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 CNDP2Q96KP4 475 aaKnown RBP2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 ADAD1Q96M93 576 aaKnown RBP2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 RTKNQ9BST9 563 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 KATNAL1Q9BW62 490 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 TRIM6Q9C030 488 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 MAP6D1Q9H9H5 199 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 GRPEL1Q9HAV7 217 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 PNRC2Q9NPJ4 139 aaKnown RBP2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 SIRT3Q9NTG7 399 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 ATP8A2Q9NTI2 1148 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 HIF1ANQ9NWT6 349 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 COMMD8Q9NX08 183 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 FNIP2Q9P278 1114 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 IFT80Q9P2H3 777 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 TBC1D14Q9P2M4 693 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 ORC3Q9UBD5 711 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 HERC5Q9UII4 1024 aaKnown RBP2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 ZHX1Q9UKY1 873 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 PA2G4Q9UQ80 394 aaKnown RBP2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 SMC3Q9UQE7 1217 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 PKP3Q9Y446 797 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 SLC4A4Q9Y6R1 1079 aa2.79□□□□□ -1.96
HMGB1P24-202ENST00000615653 A0A087X0M5 115 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 A0A1B0GX30 115 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 CXorf65A6NEN9 183 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 A6NLC8 198 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 AQP12BA6NM10 295 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 EYA2O00167 538 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 IPO5O00410 1097 aaKnown RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 TNFRSF13BO14836 293 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 B3GALNT1O75752 331 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 TBX18O95935 607 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 NGFRP08138 427 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 CCDC175P0C221 793 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 THEGLP0DJG4 465 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 EEF2P13639 858 aaKnown RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 HOXB9P17482 250 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 ARRB2P32121 409 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 MLH1P40692 756 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 RCAN1P53805 252 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 EVCP57679 992 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 ARF3P61204 181 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 DCAF7P61962 342 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 ARF1P84077 181 aaKnown RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 RHAGQ02094 409 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 CDC16Q13042 620 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 E2F5Q15329 346 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 MEA1Q16626 185 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 ARMC4Q5T2S8 1044 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 HIST2H2BCQ6DN03 193 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 NFRKBQ6P4R8 1299 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 AAGABQ6PD74 315 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 ANKS1BQ7Z6G8 1248 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 CAMK1DQ8IU85 385 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 UNC45BQ8IWX7 931 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 DPP10Q8N608 796 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 CCDC191Q8NCU4 936 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 C7orf57Q8NEG2 295 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 SPATA18Q8TC71 538 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 ASB5Q8WWX0 329 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 CPT1BQ92523 772 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 RUBCNQ92622 972 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 MIB2Q96AX9 1013 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 ZNF479Q96JC4 524 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 JAKMIP1Q96N16 626 aaKnown RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 CAMK1GQ96NX5 476 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 PIGSQ96S52 555 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 NCAPGQ9BPX3 1015 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 PAIP2Q9BPZ3 127 aaKnown RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 ZPBPQ9BS86 351 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 NTPCRQ9BSD7 190 aaKnown RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 SORBS1Q9BX66 1292 aaKnown RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 ISCUQ9H1K1 167 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 ACTR5Q9H9F9 607 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 IL21RQ9HBE5 538 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 KRT84Q9NSB2 600 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 WDR35Q9P2L0 1181 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 AASSQ9UDR5 926 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 RASAL2Q9UJF2 1139 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 C19orf53Q9UNZ5 99 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 RRP15Q9Y3B9 282 aaKnown RBP2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 KNSTRNQ9Y448 316 aa2.78□□□□□ -1.96
HMGB1P24-202ENST00000615653 SOS1Q07889 1333 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 SYNJ2BP-COX16A0A087WUM0 186 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 H0Y3Z8 333 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 H7C0S8 307 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 PSMA7O14818 248 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 HNRNPRO43390 633 aaKnown RBP2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 KIF5CO60282 957 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 CCNT1O60563 726 aaKnown RBP2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 ACTL6BO94805 426 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 HSPA4LO95757 839 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 IGKV3-20P01619 116 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 HLA-DQA2P01906 255 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 HOXC6P09630 235 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 MYZAPP0CAP1 466 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 KRT13P13646 458 aa2.77□□□□□ -1.97
HMGB1P24-202ENST00000615653 P4HA1P13674 534 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms