RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 SPON2Q9BUD6 331 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 BLOC1S4Q9NUP1 217 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 PLA2G4CQ9UP65 541 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 SAMHD1Q9Y3Z3 626 aaKnown RBP13.88□□□□□ -0.19
CHD1-212ENST00000614616 RNASEH1O60930 286 aaKnown RBP13.88□□□□□ -0.19
CHD1-212ENST00000614616 RPLP0P05388 317 aaKnown RBP13.88□□□□□ -0.19
CHD1-212ENST00000614616 IL31Q6EBC2 164 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 AKAP1Q92667 903 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHD1-212ENST00000614616 ACSS3Q9H6R3 686 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 COG5Q9UP83 839 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 PRKACBP22694 351 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 HARS2P49590 506 aaKnown RBP13.88□□□□□ -0.19
CHD1-212ENST00000614616 KIAA1841Q6NSI8 718 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 YTHDF1Q9BYJ9 559 aaKnown RBP13.88□□□□□ -0.19
CHD1-212ENST00000614616 ARHGAP28Q9P2N2 729 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 SALL1Q9NSC2 1324 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 PABPC4LP0CB38 370 aaKnown RBP13.88□□□□□ -0.19
CHD1-212ENST00000614616 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
CHD1-212ENST00000614616 RPS9P46781 194 aaKnown RBP13.88□□□□□ -0.19
CHD1-212ENST00000614616 SYT15Q9BQS2 421 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 ADI1Q9BV57 179 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 LGALS13Q9UHV8 139 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 PRAMEF22A3QJZ6 481 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 ERI2A8K979 691 aaKnown RBP13.88□□□□□ -0.19
CHD1-212ENST00000614616 APOC4-APOC2K7ER74 178 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 SLC22A2O15244 555 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 ZW10O43264 779 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 APOC2P02655 101 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 ZNF24P17028 368 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 INTS11Q5TA45 600 aaKnown RBP13.88□□□□□ -0.19
CHD1-212ENST00000614616 PTCHD4Q6ZW05 846 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 TBCDQ9BTW9 1192 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 IL25Q9H293 177 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 PDGFCQ9NRA1 345 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 GTF2A1LQ9UNN4 478 aa13.88□□□□□ -0.19
CHD1-212ENST00000614616 ERCC2P18074 760 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 CIAPIN1Q6FI81 312 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 PIH1D2Q8WWB5 315 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 HPDLQ96IR7 371 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 VPS35Q96QK1 796 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 WASF2Q9Y6W5 498 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 FAM25EA8MYX2 175 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 AKAP3O75969 853 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 PGDP52209 483 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 ZNF181Q2M3W8 571 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 APBA2Q99767 749 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 CATSPERZQ9NTU4 200 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 TBC1D24Q9ULP9 559 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 CHP2O43745 196 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 TULP3O75386 442 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 PRG2P13727 222 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 ITGALP20701 1170 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 ENDOVQ8N8Q3 282 aaKnown RBP13.87□□□□□ -0.19
CHD1-212ENST00000614616 NACC2Q96BF6 587 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 EGFL7Q9UHF1 273 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 MRPS7Q9Y2R9 242 aaKnown RBP13.87□□□□□ -0.19
CHD1-212ENST00000614616 PRKCQQ04759 706 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 SVOPLQ8N434 492 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 TMEM109Q9BVC6 243 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 DHX33Q9H6R0 707 aaKnown RBP13.87□□□□□ -0.19
CHD1-212ENST00000614616 ZNF112Q9UJU3 913 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 CHST10O43529 356 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 MPZL2O60487 215 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 OXSR1O95747 527 aaPredicted RBP13.87□□□□□ -0.19
CHD1-212ENST00000614616 MOCS2O96007 188 aaPredicted RBP13.87□□□□□ -0.19
CHD1-212ENST00000614616 MT-CO1P00395 513 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 NCAM1P13591 858 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 IGFBP5P24593 272 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 CHKAP35790 457 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 ACTR3P61158 418 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 ZNF655Q8N720 491 aaPredicted RBP13.87□□□□□ -0.19
CHD1-212ENST00000614616 ASCC1Q8N9N2 400 aaKnown RBP13.87□□□□□ -0.19
CHD1-212ENST00000614616 LPCAT1Q8NF37 534 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 SSU72Q9NP77 194 aaKnown RBP13.87□□□□□ -0.19
CHD1-212ENST00000614616 REXO2Q9Y3B8 237 aaKnown RBP13.87□□□□□ -0.19
CHD1-212ENST00000614616 MLYCDO95822 493 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 ARHGDIBP52566 201 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 HS6ST3Q8IZP7 471 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 C11orf24Q96F05 449 aaPredicted RBP13.87□□□□□ -0.19
CHD1-212ENST00000614616 SLITRK1Q96PX8 696 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 PTGFRNQ9P2B2 879 aa13.87□□□□□ -0.19
CHD1-212ENST00000614616 PRKCIP41743 596 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 CDH4P55283 916 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 CDH17Q12864 832 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 DLG1Q12959 904 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 FSCN1Q16658 493 aaKnown RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 TRPM5Q9NZQ8 1165 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 UBQLN2Q9UHD9 624 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 TLL2Q9Y6L7 1015 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 ZNF99A8MXY4 864 aaPredicted RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 LIASO43766 372 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 IQSEC1Q6DN90 963 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 ISOC1Q96CN7 298 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 PRKD2Q9BZL6 878 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 KLHL28Q9NXS3 571 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 ERVK-10P10266 1014 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 PITPNAQ00169 270 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 CMPK2Q5EBM0 449 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 APOL2Q9BQE5 337 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms